Hb_000809_130

Information

Type -
Description -
Location Contig809: 118965-123939
Sequence    

Annotation

kegg
ID pop:POPTR_0005s14190g
description POPTRDRAFT_208491; peroxidase family protein
nr
ID XP_012079186.1
description PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
swissprot
ID Q9FX85
description Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1
trembl
ID B9H6D9
description Peroxidase OS=Populus trichocarpa GN=PRX35 PE=2 SV=2
Gene Ontology
ID GO:0005576
description peroxidase 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59145: 119127-119448 , PASA_asmbl_59147: 122644-124065
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_130 0.0 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
2 Hb_004223_080 0.0932243751 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
3 Hb_000103_370 0.0953710804 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
4 Hb_006196_030 0.1029441646 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
5 Hb_000905_100 0.1064961573 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
6 Hb_000002_370 0.1089564973 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
7 Hb_002301_400 0.1149852834 - - structural constituent of cell wall, putative [Ricinus communis]
8 Hb_003248_030 0.1167000068 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
9 Hb_001307_020 0.1215466119 - - electron carrier, putative [Ricinus communis]
10 Hb_000996_040 0.1233040109 - - hypothetical protein POPTR_0003s12500g [Populus trichocarpa]
11 Hb_001571_080 0.123306415 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
12 Hb_000392_170 0.1239874723 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
13 Hb_002639_050 0.124205057 - - multicopper oxidase, putative [Ricinus communis]
14 Hb_000836_090 0.1250427293 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
15 Hb_003502_040 0.1269578708 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
16 Hb_004316_020 0.1291123951 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
17 Hb_002490_060 0.1309697963 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
18 Hb_018563_010 0.1316443479 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
19 Hb_000395_120 0.1322431231 - - Stellacyanin, putative [Ricinus communis]
20 Hb_169893_010 0.1325054423 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]

Gene co-expression network

sample Hb_000809_130 Hb_000809_130 Hb_004223_080 Hb_004223_080 Hb_000809_130--Hb_004223_080 Hb_000103_370 Hb_000103_370 Hb_000809_130--Hb_000103_370 Hb_006196_030 Hb_006196_030 Hb_000809_130--Hb_006196_030 Hb_000905_100 Hb_000905_100 Hb_000809_130--Hb_000905_100 Hb_000002_370 Hb_000002_370 Hb_000809_130--Hb_000002_370 Hb_002301_400 Hb_002301_400 Hb_000809_130--Hb_002301_400 Hb_004223_080--Hb_000002_370 Hb_001025_140 Hb_001025_140 Hb_004223_080--Hb_001025_140 Hb_000392_170 Hb_000392_170 Hb_004223_080--Hb_000392_170 Hb_000349_250 Hb_000349_250 Hb_004223_080--Hb_000349_250 Hb_001307_020 Hb_001307_020 Hb_004223_080--Hb_001307_020 Hb_007123_010 Hb_007123_010 Hb_000103_370--Hb_007123_010 Hb_000103_370--Hb_000002_370 Hb_054926_010 Hb_054926_010 Hb_000103_370--Hb_054926_010 Hb_006922_020 Hb_006922_020 Hb_000103_370--Hb_006922_020 Hb_008019_010 Hb_008019_010 Hb_000103_370--Hb_008019_010 Hb_001159_090 Hb_001159_090 Hb_006196_030--Hb_001159_090 Hb_002490_060 Hb_002490_060 Hb_006196_030--Hb_002490_060 Hb_000996_070 Hb_000996_070 Hb_006196_030--Hb_000996_070 Hb_006196_030--Hb_002301_400 Hb_001794_040 Hb_001794_040 Hb_006196_030--Hb_001794_040 Hb_006196_030--Hb_007123_010 Hb_000836_090 Hb_000836_090 Hb_000905_100--Hb_000836_090 Hb_000905_100--Hb_000002_370 Hb_002053_180 Hb_002053_180 Hb_000905_100--Hb_002053_180 Hb_000027_160 Hb_000027_160 Hb_000905_100--Hb_000027_160 Hb_033006_020 Hb_033006_020 Hb_000905_100--Hb_033006_020 Hb_000199_040 Hb_000199_040 Hb_000002_370--Hb_000199_040 Hb_003777_120 Hb_003777_120 Hb_000002_370--Hb_003777_120 Hb_000002_370--Hb_002053_180 Hb_000002_370--Hb_000836_090 Hb_004567_070 Hb_004567_070 Hb_000002_370--Hb_004567_070 Hb_070498_010 Hb_070498_010 Hb_002301_400--Hb_070498_010 Hb_128196_010 Hb_128196_010 Hb_002301_400--Hb_128196_010 Hb_012404_020 Hb_012404_020 Hb_002301_400--Hb_012404_020 Hb_002301_400--Hb_001159_090 Hb_001195_550 Hb_001195_550 Hb_002301_400--Hb_001195_550
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.035526 3.15014 10.2306 7.05255 0.118828 0.208979
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0405704 0 0 0.511366 2.50976

CAGE analysis