Hb_000809_140

Information

Type -
Description -
Location Contig809: 124121-125125
Sequence    

Annotation

kegg
ID rcu:RCOM_0601980
description hypothetical protein
nr
ID KDP31893.1
description hypothetical protein JCGZ_12354 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12354 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59148: 124277-124478
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_140 0.0 - - hypothetical protein JCGZ_12354 [Jatropha curcas]
2 Hb_001386_100 0.1496909737 transcription factor TF Family: M-type PREDICTED: MADS-box transcription factor PHERES 1-like [Jatropha curcas]
3 Hb_001235_160 0.1545180869 - - conserved hypothetical protein [Ricinus communis]
4 Hb_095471_020 0.1751193356 - - -
5 Hb_000308_010 0.1770028473 - - PREDICTED: uncharacterized protein LOC105639684 [Jatropha curcas]
6 Hb_065755_020 0.1841947989 - - choline monooxygenase, putative [Ricinus communis]
7 Hb_001294_040 0.1865813867 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
8 Hb_173029_030 0.1901469976 - - conserved hypothetical protein [Ricinus communis]
9 Hb_078954_010 0.1908164823 - - hypothetical protein RCOM_0841800 [Ricinus communis]
10 Hb_002965_070 0.1916380411 - - PREDICTED: extensin [Jatropha curcas]
11 Hb_065133_010 0.2078447981 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
12 Hb_001021_100 0.2118746819 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
13 Hb_000506_100 0.2181306572 - - PREDICTED: BTB/POZ domain-containing protein At5g48130 [Jatropha curcas]
14 Hb_001776_200 0.2199922267 - - PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Pyrus x bretschneideri]
15 Hb_047442_010 0.2206997788 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
16 Hb_002095_050 0.2212999431 - - PREDICTED: uncharacterized protein LOC104447479 [Eucalyptus grandis]
17 Hb_001158_120 0.2218194805 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
18 Hb_004667_040 0.2237748236 - - ATP binding protein, putative [Ricinus communis]
19 Hb_004411_050 0.2260468093 - - quinone oxidoreductase-like protein [Arabidopsis thaliana]
20 Hb_014361_170 0.2262686296 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]

Gene co-expression network

sample Hb_000809_140 Hb_000809_140 Hb_001386_100 Hb_001386_100 Hb_000809_140--Hb_001386_100 Hb_001235_160 Hb_001235_160 Hb_000809_140--Hb_001235_160 Hb_095471_020 Hb_095471_020 Hb_000809_140--Hb_095471_020 Hb_000308_010 Hb_000308_010 Hb_000809_140--Hb_000308_010 Hb_065755_020 Hb_065755_020 Hb_000809_140--Hb_065755_020 Hb_001294_040 Hb_001294_040 Hb_000809_140--Hb_001294_040 Hb_001386_100--Hb_001235_160 Hb_000506_100 Hb_000506_100 Hb_001386_100--Hb_000506_100 Hb_000343_020 Hb_000343_020 Hb_001386_100--Hb_000343_020 Hb_002874_120 Hb_002874_120 Hb_001386_100--Hb_002874_120 Hb_008250_020 Hb_008250_020 Hb_001386_100--Hb_008250_020 Hb_001235_160--Hb_008250_020 Hb_001776_130 Hb_001776_130 Hb_001235_160--Hb_001776_130 Hb_002095_050 Hb_002095_050 Hb_001235_160--Hb_002095_050 Hb_000320_040 Hb_000320_040 Hb_001235_160--Hb_000320_040 Hb_006153_010 Hb_006153_010 Hb_001235_160--Hb_006153_010 Hb_095471_020--Hb_065755_020 Hb_001776_200 Hb_001776_200 Hb_095471_020--Hb_001776_200 Hb_004667_040 Hb_004667_040 Hb_095471_020--Hb_004667_040 Hb_078954_010 Hb_078954_010 Hb_095471_020--Hb_078954_010 Hb_005724_050 Hb_005724_050 Hb_095471_020--Hb_005724_050 Hb_095471_020--Hb_001294_040 Hb_008173_130 Hb_008173_130 Hb_000308_010--Hb_008173_130 Hb_004712_090 Hb_004712_090 Hb_000308_010--Hb_004712_090 Hb_011918_030 Hb_011918_030 Hb_000308_010--Hb_011918_030 Hb_000134_260 Hb_000134_260 Hb_000308_010--Hb_000134_260 Hb_015531_010 Hb_015531_010 Hb_000308_010--Hb_015531_010 Hb_002965_070 Hb_002965_070 Hb_000308_010--Hb_002965_070 Hb_065755_020--Hb_078954_010 Hb_046109_010 Hb_046109_010 Hb_065755_020--Hb_046109_010 Hb_065755_020--Hb_004667_040 Hb_032202_050 Hb_032202_050 Hb_065755_020--Hb_032202_050 Hb_065755_020--Hb_002965_070 Hb_001158_120 Hb_001158_120 Hb_001294_040--Hb_001158_120 Hb_011381_070 Hb_011381_070 Hb_001294_040--Hb_011381_070 Hb_014361_170 Hb_014361_170 Hb_001294_040--Hb_014361_170 Hb_000366_050 Hb_000366_050 Hb_001294_040--Hb_000366_050 Hb_000008_430 Hb_000008_430 Hb_001294_040--Hb_000008_430 Hb_000035_490 Hb_000035_490 Hb_001294_040--Hb_000035_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0659732 0.209377 0.509161 0.12138 0.0618367 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.11149 0.0810616

CAGE analysis