Hb_000809_160

Information

Type -
Description -
Location Contig809: 130179-135751
Sequence    

Annotation

kegg
ID mdm:103450414
description guanine nucleotide-binding protein subunit beta-like protein 1 homolog
nr
ID KDP31894.1
description hypothetical protein JCGZ_12355 [Jatropha curcas]
swissprot
ID F1DLK1
description Protein DECREASED SIZE EXCLUSION LIMIT 1 OS=Nicotiana benthamiana GN=DSE1 PE=2 SV=1
trembl
ID A0A067KJ82
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12355 PE=4 SV=1
Gene Ontology
ID GO:0080008
description guanine nucleotide-binding protein subunit beta-like protein 1 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59149: 130329-145232 , PASA_asmbl_59152: 130329-144096 , PASA_asmbl_59153: 131611-132129
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_160 0.0 - - hypothetical protein JCGZ_12355 [Jatropha curcas]
2 Hb_000094_090 0.0476631252 - - PREDICTED: DUF21 domain-containing protein At1g47330 isoform X1 [Jatropha curcas]
3 Hb_002477_250 0.0574045254 - - DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus communis]
4 Hb_031641_010 0.0586398317 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000866_450 0.0587427485 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
6 Hb_000120_910 0.0591295486 - - plant ubiquilin, putative [Ricinus communis]
7 Hb_000363_120 0.0604167356 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
8 Hb_000723_110 0.0609591825 - - PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]
9 Hb_001754_030 0.0634385831 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
10 Hb_000340_030 0.0648993049 - - PREDICTED: myosin heavy chain, non-muscle-like [Jatropha curcas]
11 Hb_000069_130 0.0656916473 - - PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]
12 Hb_012565_050 0.0709590981 - - PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Jatropha curcas]
13 Hb_023226_070 0.0722959557 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004976_010 0.0740520383 - - hypothetical protein RCOM_1429110 [Ricinus communis]
15 Hb_000529_060 0.0741207954 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Jatropha curcas]
16 Hb_001545_150 0.0747552449 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105635527 [Jatropha curcas]
17 Hb_000949_020 0.074819717 transcription factor TF Family: Orphans PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]
18 Hb_002542_130 0.0758045011 transcription factor TF Family: HB Homeobox protein LUMINIDEPENDENS, putative [Ricinus communis]
19 Hb_004410_070 0.0761442305 - - PREDICTED: protein LTV1 homolog [Jatropha curcas]
20 Hb_000373_230 0.0762233186 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000809_160 Hb_000809_160 Hb_000094_090 Hb_000094_090 Hb_000809_160--Hb_000094_090 Hb_002477_250 Hb_002477_250 Hb_000809_160--Hb_002477_250 Hb_031641_010 Hb_031641_010 Hb_000809_160--Hb_031641_010 Hb_000866_450 Hb_000866_450 Hb_000809_160--Hb_000866_450 Hb_000120_910 Hb_000120_910 Hb_000809_160--Hb_000120_910 Hb_000363_120 Hb_000363_120 Hb_000809_160--Hb_000363_120 Hb_000094_090--Hb_000363_120 Hb_000723_110 Hb_000723_110 Hb_000094_090--Hb_000723_110 Hb_000373_230 Hb_000373_230 Hb_000094_090--Hb_000373_230 Hb_023226_070 Hb_023226_070 Hb_000094_090--Hb_023226_070 Hb_004870_050 Hb_004870_050 Hb_000094_090--Hb_004870_050 Hb_002325_040 Hb_002325_040 Hb_002477_250--Hb_002325_040 Hb_001754_030 Hb_001754_030 Hb_002477_250--Hb_001754_030 Hb_003470_030 Hb_003470_030 Hb_002477_250--Hb_003470_030 Hb_000264_070 Hb_000264_070 Hb_002477_250--Hb_000264_070 Hb_001135_120 Hb_001135_120 Hb_002477_250--Hb_001135_120 Hb_000340_030 Hb_000340_030 Hb_031641_010--Hb_000340_030 Hb_002849_170 Hb_002849_170 Hb_031641_010--Hb_002849_170 Hb_001723_010 Hb_001723_010 Hb_031641_010--Hb_001723_010 Hb_000529_060 Hb_000529_060 Hb_031641_010--Hb_000529_060 Hb_004204_130 Hb_004204_130 Hb_031641_010--Hb_004204_130 Hb_005288_140 Hb_005288_140 Hb_000866_450--Hb_005288_140 Hb_000866_450--Hb_000094_090 Hb_102438_030 Hb_102438_030 Hb_000866_450--Hb_102438_030 Hb_001245_050 Hb_001245_050 Hb_000866_450--Hb_001245_050 Hb_000866_450--Hb_000723_110 Hb_004517_020 Hb_004517_020 Hb_000120_910--Hb_004517_020 Hb_000977_300 Hb_000977_300 Hb_000120_910--Hb_000977_300 Hb_027654_020 Hb_027654_020 Hb_000120_910--Hb_027654_020 Hb_000949_020 Hb_000949_020 Hb_000120_910--Hb_000949_020 Hb_000120_910--Hb_001723_010 Hb_000363_120--Hb_031641_010 Hb_000363_120--Hb_000340_030 Hb_004899_040 Hb_004899_040 Hb_000363_120--Hb_004899_040 Hb_001545_150 Hb_001545_150 Hb_000363_120--Hb_001545_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.6487 19.7442 14.1304 12.2037 11.1226 8.19888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.99077 7.547 6.48511 8.80607 8.61849

CAGE analysis