Hb_000809_190

Information

Type -
Description -
Location Contig809: 151392-152363
Sequence    

Annotation

kegg
ID rcu:RCOM_0601940
description hypothetical protein
nr
ID XP_012079570.1
description PREDICTED: myosin-6-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6M9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12357 PE=4 SV=1
Gene Ontology
ID GO:0008152
description eukaryotic translation initiation factor 3 subunit a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000809_190 0.0 - - PREDICTED: myosin-6-like [Jatropha curcas]
2 Hb_000445_270 0.0768843692 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000115_020 0.0797034908 transcription factor TF Family: C2C2-CO-like zinc finger family protein [Populus trichocarpa]
4 Hb_101133_030 0.0813123792 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
5 Hb_000340_280 0.0878336327 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001864_050 0.088308911 - - chloroplast oxygen-evolving enhancer protein [Manihot esculenta]
7 Hb_000749_140 0.0884926951 - - PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal [Jatropha curcas]
8 Hb_001916_110 0.0887737415 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
9 Hb_002025_220 0.0908679979 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
10 Hb_124677_010 0.0947635606 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001006_150 0.096670383 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
12 Hb_005649_060 0.0981589133 - - PREDICTED: uncharacterized protein LOC105644161 [Jatropha curcas]
13 Hb_000359_050 0.0986831472 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
14 Hb_002805_200 0.09870006 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
15 Hb_006775_100 0.0988160694 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
16 Hb_003683_170 0.0994601298 - - conserved hypothetical protein [Ricinus communis]
17 Hb_080922_010 0.1039948868 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
18 Hb_003651_030 0.1043896266 - - lyase, putative [Ricinus communis]
19 Hb_002762_020 0.1051326663 - - hypothetical protein VITISV_043202 [Vitis vinifera]
20 Hb_001102_130 0.1053928028 transcription factor TF Family: PHD PREDICTED: protein Jade-1 [Populus euphratica]

Gene co-expression network

sample Hb_000809_190 Hb_000809_190 Hb_000445_270 Hb_000445_270 Hb_000809_190--Hb_000445_270 Hb_000115_020 Hb_000115_020 Hb_000809_190--Hb_000115_020 Hb_101133_030 Hb_101133_030 Hb_000809_190--Hb_101133_030 Hb_000340_280 Hb_000340_280 Hb_000809_190--Hb_000340_280 Hb_001864_050 Hb_001864_050 Hb_000809_190--Hb_001864_050 Hb_000749_140 Hb_000749_140 Hb_000809_190--Hb_000749_140 Hb_001006_150 Hb_001006_150 Hb_000445_270--Hb_001006_150 Hb_080922_010 Hb_080922_010 Hb_000445_270--Hb_080922_010 Hb_005649_060 Hb_005649_060 Hb_000445_270--Hb_005649_060 Hb_000359_050 Hb_000359_050 Hb_000445_270--Hb_000359_050 Hb_005329_010 Hb_005329_010 Hb_000445_270--Hb_005329_010 Hb_000445_270--Hb_001864_050 Hb_000115_020--Hb_005649_060 Hb_000937_010 Hb_000937_010 Hb_000115_020--Hb_000937_010 Hb_000115_020--Hb_000445_270 Hb_004712_220 Hb_004712_220 Hb_000115_020--Hb_004712_220 Hb_001751_050 Hb_001751_050 Hb_000115_020--Hb_001751_050 Hb_101133_030--Hb_000340_280 Hb_101133_030--Hb_000749_140 Hb_001014_240 Hb_001014_240 Hb_101133_030--Hb_001014_240 Hb_101133_030--Hb_000359_050 Hb_001233_050 Hb_001233_050 Hb_101133_030--Hb_001233_050 Hb_003651_030 Hb_003651_030 Hb_101133_030--Hb_003651_030 Hb_000340_280--Hb_000359_050 Hb_002805_200 Hb_002805_200 Hb_000340_280--Hb_002805_200 Hb_000340_280--Hb_003651_030 Hb_000281_120 Hb_000281_120 Hb_000340_280--Hb_000281_120 Hb_000340_280--Hb_001006_150 Hb_001864_050--Hb_002805_200 Hb_001338_120 Hb_001338_120 Hb_001864_050--Hb_001338_120 Hb_001864_050--Hb_001006_150 Hb_000482_160 Hb_000482_160 Hb_001864_050--Hb_000482_160 Hb_001864_050--Hb_000281_120 Hb_005305_140 Hb_005305_140 Hb_001864_050--Hb_005305_140 Hb_001916_110 Hb_001916_110 Hb_000749_140--Hb_001916_110 Hb_000749_140--Hb_000340_280 Hb_000749_140--Hb_001233_050 Hb_001942_060 Hb_001942_060 Hb_000749_140--Hb_001942_060 Hb_000928_100 Hb_000928_100 Hb_000749_140--Hb_000928_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0421126 0.541218 0.0563334 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0166186 0.505831

CAGE analysis