Hb_000811_070

Information

Type -
Description -
Location Contig811: 89149-90677
Sequence    

Annotation

kegg
ID pop:POPTR_0012s05150g
description POPTRDRAFT_772684; hypothetical protein
nr
ID XP_012093029.1
description PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05909 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59249: 89561-90544
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000811_070 0.0 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
2 Hb_006846_150 0.0461482365 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008421_020 0.0619549361 - - PREDICTED: uncharacterized protein LOC105635546 isoform X2 [Jatropha curcas]
4 Hb_000487_260 0.0634211247 - - PREDICTED: protein Iojap, chloroplastic [Jatropha curcas]
5 Hb_007904_230 0.0694350047 - - PREDICTED: D-cysteine desulfhydrase 2, mitochondrial [Jatropha curcas]
6 Hb_006740_030 0.0760471023 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
7 Hb_005167_010 0.0776127434 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
8 Hb_062226_060 0.0802800122 - - PREDICTED: mitochondrial substrate carrier family protein B-like [Jatropha curcas]
9 Hb_001541_120 0.0808144404 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
10 Hb_005016_040 0.081369252 transcription factor TF Family: E2F-DP PREDICTED: transcription factor-like protein DPB isoform X2 [Jatropha curcas]
11 Hb_012799_170 0.0841538883 - - PREDICTED: protein GLC8 isoform X2 [Jatropha curcas]
12 Hb_007192_030 0.0843848617 - - PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
13 Hb_001287_040 0.084468528 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
14 Hb_001322_110 0.0846232819 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001900_140 0.0858964391 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Jatropha curcas]
16 Hb_001277_100 0.0871151498 - - PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like isoform X1 [Gossypium raimondii]
17 Hb_007002_020 0.0879874625 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
18 Hb_006132_090 0.0889137002 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
19 Hb_011689_120 0.0906145895 - - PREDICTED: uncharacterized protein At4g15545 [Jatropha curcas]
20 Hb_004951_060 0.090800416 - - PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]

Gene co-expression network

sample Hb_000811_070 Hb_000811_070 Hb_006846_150 Hb_006846_150 Hb_000811_070--Hb_006846_150 Hb_008421_020 Hb_008421_020 Hb_000811_070--Hb_008421_020 Hb_000487_260 Hb_000487_260 Hb_000811_070--Hb_000487_260 Hb_007904_230 Hb_007904_230 Hb_000811_070--Hb_007904_230 Hb_006740_030 Hb_006740_030 Hb_000811_070--Hb_006740_030 Hb_005167_010 Hb_005167_010 Hb_000811_070--Hb_005167_010 Hb_011689_120 Hb_011689_120 Hb_006846_150--Hb_011689_120 Hb_000403_070 Hb_000403_070 Hb_006846_150--Hb_000403_070 Hb_006846_150--Hb_000487_260 Hb_004951_060 Hb_004951_060 Hb_006846_150--Hb_004951_060 Hb_012799_170 Hb_012799_170 Hb_006846_150--Hb_012799_170 Hb_013405_020 Hb_013405_020 Hb_008421_020--Hb_013405_020 Hb_001541_120 Hb_001541_120 Hb_008421_020--Hb_001541_120 Hb_003153_010 Hb_003153_010 Hb_008421_020--Hb_003153_010 Hb_004108_160 Hb_004108_160 Hb_008421_020--Hb_004108_160 Hb_005016_040 Hb_005016_040 Hb_008421_020--Hb_005016_040 Hb_019053_060 Hb_019053_060 Hb_000487_260--Hb_019053_060 Hb_000796_160 Hb_000796_160 Hb_000487_260--Hb_000796_160 Hb_001935_100 Hb_001935_100 Hb_000487_260--Hb_001935_100 Hb_000487_260--Hb_008421_020 Hb_000364_050 Hb_000364_050 Hb_007904_230--Hb_000364_050 Hb_003266_030 Hb_003266_030 Hb_007904_230--Hb_003266_030 Hb_007192_030 Hb_007192_030 Hb_007904_230--Hb_007192_030 Hb_000080_130 Hb_000080_130 Hb_007904_230--Hb_000080_130 Hb_049575_010 Hb_049575_010 Hb_007904_230--Hb_049575_010 Hb_000140_090 Hb_000140_090 Hb_006740_030--Hb_000140_090 Hb_006740_030--Hb_001541_120 Hb_000928_070 Hb_000928_070 Hb_006740_030--Hb_000928_070 Hb_006740_030--Hb_008421_020 Hb_007533_040 Hb_007533_040 Hb_006740_030--Hb_007533_040 Hb_001195_060 Hb_001195_060 Hb_005167_010--Hb_001195_060 Hb_005167_010--Hb_012799_170 Hb_006132_090 Hb_006132_090 Hb_005167_010--Hb_006132_090 Hb_005167_010--Hb_000080_130 Hb_004545_110 Hb_004545_110 Hb_005167_010--Hb_004545_110 Hb_007975_060 Hb_007975_060 Hb_005167_010--Hb_007975_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.13748 1.40759 3.41132 2.42134 1.38008 1.28115
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.23908 3.40731 2.61276 1.58456 4.23895

CAGE analysis