Hb_000815_060

Information

Type -
Description -
Location Contig815: 84775-101144
Sequence    

Annotation

kegg
ID pmum:103321681
description uncharacterized LOC103321681
nr
ID XP_012067668.1
description PREDICTED: uncharacterized protein LOC105630460 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L214
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15625 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59348: 96176-96323
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_060 0.0 - - PREDICTED: uncharacterized protein LOC105630460 [Jatropha curcas]
2 Hb_022425_040 0.0526878629 - - PREDICTED: probable RNA methyltransferase At5g51130 [Jatropha curcas]
3 Hb_000217_030 0.0740817335 - - Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1 [Theobroma cacao]
4 Hb_000417_360 0.0798812528 - - PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Jatropha curcas]
5 Hb_002518_080 0.0811516444 - - PREDICTED: uncharacterized protein LOC105639837 [Jatropha curcas]
6 Hb_001047_230 0.0869332956 - - WD-repeat protein, putative [Ricinus communis]
7 Hb_011671_100 0.0896706432 - - 60S ribosomal protein L15 [Populus trichocarpa]
8 Hb_001832_060 0.0905323941 - - PREDICTED: translation machinery-associated protein 22 [Jatropha curcas]
9 Hb_001691_140 0.0913838314 - - mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
10 Hb_003656_070 0.0922694639 - - hypothetical protein CICLE_v10009411mg [Citrus clementina]
11 Hb_000920_110 0.0928612809 - - PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Jatropha curcas]
12 Hb_015279_010 0.0949572024 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
13 Hb_003787_010 0.0966553206 - - PREDICTED: 40S ribosomal protein S3-3-like [Phoenix dactylifera]
14 Hb_000111_330 0.0971250154 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Jatropha curcas]
15 Hb_010175_040 0.0988760168 - - PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Jatropha curcas]
16 Hb_000450_130 0.1002727095 - - PREDICTED: uncharacterized protein LOC105630216 [Jatropha curcas]
17 Hb_008771_030 0.1005636314 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
18 Hb_000127_180 0.1016150806 - - 40S ribosomal protein S18, putative [Ricinus communis]
19 Hb_000035_370 0.1021230624 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006478_160 0.1022365406 - - 20S proteasome beta subunit D1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000815_060 Hb_000815_060 Hb_022425_040 Hb_022425_040 Hb_000815_060--Hb_022425_040 Hb_000217_030 Hb_000217_030 Hb_000815_060--Hb_000217_030 Hb_000417_360 Hb_000417_360 Hb_000815_060--Hb_000417_360 Hb_002518_080 Hb_002518_080 Hb_000815_060--Hb_002518_080 Hb_001047_230 Hb_001047_230 Hb_000815_060--Hb_001047_230 Hb_011671_100 Hb_011671_100 Hb_000815_060--Hb_011671_100 Hb_022425_040--Hb_002518_080 Hb_015279_010 Hb_015279_010 Hb_022425_040--Hb_015279_010 Hb_022425_040--Hb_000217_030 Hb_000127_180 Hb_000127_180 Hb_022425_040--Hb_000127_180 Hb_001832_060 Hb_001832_060 Hb_022425_040--Hb_001832_060 Hb_003787_010 Hb_003787_010 Hb_000217_030--Hb_003787_010 Hb_004116_190 Hb_004116_190 Hb_000217_030--Hb_004116_190 Hb_002995_020 Hb_002995_020 Hb_000217_030--Hb_002995_020 Hb_001691_140 Hb_001691_140 Hb_000217_030--Hb_001691_140 Hb_000217_030--Hb_002518_080 Hb_010175_040 Hb_010175_040 Hb_000417_360--Hb_010175_040 Hb_091433_020 Hb_091433_020 Hb_000417_360--Hb_091433_020 Hb_000920_110 Hb_000920_110 Hb_000417_360--Hb_000920_110 Hb_000731_190 Hb_000731_190 Hb_000417_360--Hb_000731_190 Hb_001085_120 Hb_001085_120 Hb_000417_360--Hb_001085_120 Hb_000261_140 Hb_000261_140 Hb_000417_360--Hb_000261_140 Hb_002518_080--Hb_000127_180 Hb_002518_080--Hb_015279_010 Hb_114893_030 Hb_114893_030 Hb_002518_080--Hb_114893_030 Hb_001504_110 Hb_001504_110 Hb_002518_080--Hb_001504_110 Hb_003656_070 Hb_003656_070 Hb_001047_230--Hb_003656_070 Hb_000608_370 Hb_000608_370 Hb_001047_230--Hb_000608_370 Hb_001047_230--Hb_000920_110 Hb_129204_030 Hb_129204_030 Hb_001047_230--Hb_129204_030 Hb_000334_210 Hb_000334_210 Hb_001047_230--Hb_000334_210 Hb_007416_030 Hb_007416_030 Hb_001047_230--Hb_007416_030 Hb_011671_100--Hb_001691_140 Hb_011671_100--Hb_003787_010 Hb_000172_320 Hb_000172_320 Hb_011671_100--Hb_000172_320 Hb_011671_100--Hb_015279_010 Hb_004767_080 Hb_004767_080 Hb_011671_100--Hb_004767_080 Hb_011671_100--Hb_000417_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.593241 0.389412 0.344652 0.409023 0.336525 0.236409
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.713201 1.43373 0.580389 0.436835 0.258297

CAGE analysis