Hb_000815_070

Information

Type -
Description -
Location Contig815: 107492-110298
Sequence    

Annotation

kegg
ID rcu:RCOM_0837260
description S-adenosylmethionine-dependent methyltransferase, putative
nr
ID XP_012067670.1
description PREDICTED: methyltransferase-like protein 7A [Jatropha curcas]
swissprot
ID Q9H8H3
description Methyltransferase-like protein 7A OS=Homo sapiens GN=METTL7A PE=1 SV=1
trembl
ID A0A067L9S6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15627 PE=4 SV=1
Gene Ontology
ID GO:0008168
description methyltransferase-like protein 7a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59351: 107524-108157 , PASA_asmbl_59352: 108162-110120
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_070 0.0 - - PREDICTED: methyltransferase-like protein 7A [Jatropha curcas]
2 Hb_000329_320 0.0751318663 - - PREDICTED: DNA ligase 1 [Jatropha curcas]
3 Hb_000985_030 0.0754126894 - - PREDICTED: RRP15-like protein [Populus euphratica]
4 Hb_011716_130 0.0765692515 - - PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X5 [Populus euphratica]
5 Hb_002600_090 0.0766813613 - - ATP binding protein, putative [Ricinus communis]
6 Hb_032264_070 0.0795925081 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Jatropha curcas]
7 Hb_001489_080 0.0850993805 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_005269_070 0.0876549579 - - PREDICTED: translation factor GUF1 homolog, organellar chromatophore [Jatropha curcas]
9 Hb_000260_030 0.0899967165 transcription factor TF Family: IWS1 transcription elongation factor s-II, putative [Ricinus communis]
10 Hb_005183_120 0.0903064091 - - protein translocase, putative [Ricinus communis]
11 Hb_000302_180 0.0921963185 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_022693_140 0.0928204269 - - PREDICTED: uncharacterized protein LOC105632654 isoform X1 [Jatropha curcas]
13 Hb_000207_050 0.094902499 - - PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]
14 Hb_003939_050 0.0950598216 - - protein with unknown function [Ricinus communis]
15 Hb_001629_080 0.0969466964 - - hypothetical protein POPTR_0011s12610g [Populus trichocarpa]
16 Hb_156279_020 0.0976955271 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
17 Hb_002490_020 0.0979531114 - - peptidyl-tRNA hydrolase family protein [Populus trichocarpa]
18 Hb_002835_040 0.0982793904 - - PREDICTED: quinolinate synthase, chloroplastic [Jatropha curcas]
19 Hb_000866_260 0.0983507792 - - PREDICTED: F-box/kelch-repeat protein SKIP4 isoform X1 [Jatropha curcas]
20 Hb_001268_420 0.0990224073 - - PREDICTED: uncharacterized protein LOC105630158 [Jatropha curcas]

Gene co-expression network

sample Hb_000815_070 Hb_000815_070 Hb_000329_320 Hb_000329_320 Hb_000815_070--Hb_000329_320 Hb_000985_030 Hb_000985_030 Hb_000815_070--Hb_000985_030 Hb_011716_130 Hb_011716_130 Hb_000815_070--Hb_011716_130 Hb_002600_090 Hb_002600_090 Hb_000815_070--Hb_002600_090 Hb_032264_070 Hb_032264_070 Hb_000815_070--Hb_032264_070 Hb_001489_080 Hb_001489_080 Hb_000815_070--Hb_001489_080 Hb_000329_320--Hb_032264_070 Hb_005269_070 Hb_005269_070 Hb_000329_320--Hb_005269_070 Hb_002490_020 Hb_002490_020 Hb_000329_320--Hb_002490_020 Hb_000917_060 Hb_000917_060 Hb_000329_320--Hb_000917_060 Hb_000883_020 Hb_000883_020 Hb_000329_320--Hb_000883_020 Hb_000866_260 Hb_000866_260 Hb_000329_320--Hb_000866_260 Hb_000985_030--Hb_001489_080 Hb_002169_040 Hb_002169_040 Hb_000985_030--Hb_002169_040 Hb_000783_020 Hb_000783_020 Hb_000985_030--Hb_000783_020 Hb_000777_040 Hb_000777_040 Hb_000985_030--Hb_000777_040 Hb_000985_030--Hb_005269_070 Hb_004934_100 Hb_004934_100 Hb_000985_030--Hb_004934_100 Hb_005847_060 Hb_005847_060 Hb_011716_130--Hb_005847_060 Hb_002811_130 Hb_002811_130 Hb_011716_130--Hb_002811_130 Hb_000224_160 Hb_000224_160 Hb_011716_130--Hb_000224_160 Hb_011716_130--Hb_002600_090 Hb_012022_150 Hb_012022_150 Hb_011716_130--Hb_012022_150 Hb_002600_090--Hb_000985_030 Hb_001971_010 Hb_001971_010 Hb_002600_090--Hb_001971_010 Hb_000599_250 Hb_000599_250 Hb_002600_090--Hb_000599_250 Hb_000260_030 Hb_000260_030 Hb_002600_090--Hb_000260_030 Hb_001711_020 Hb_001711_020 Hb_002600_090--Hb_001711_020 Hb_002600_090--Hb_001489_080 Hb_000656_240 Hb_000656_240 Hb_032264_070--Hb_000656_240 Hb_001268_420 Hb_001268_420 Hb_032264_070--Hb_001268_420 Hb_032264_070--Hb_000985_030 Hb_000614_160 Hb_000614_160 Hb_032264_070--Hb_000614_160 Hb_000046_050 Hb_000046_050 Hb_032264_070--Hb_000046_050 Hb_001489_080--Hb_004934_100 Hb_001489_080--Hb_000783_020 Hb_001489_080--Hb_000599_250 Hb_000003_230 Hb_000003_230 Hb_001489_080--Hb_000003_230 Hb_001489_080--Hb_002169_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.6156 4.18699 13.7186 7.44447 11.6886 10.5928
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.4261 14.0137 17.7771 11.9318 14.8387

CAGE analysis