Hb_000815_220

Information

Type -
Description -
Location Contig815: 233850-235265
Sequence    

Annotation

kegg
ID rcu:RCOM_0837580
description hypothetical protein
nr
ID XP_002522471.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S902
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0837580 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_220 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001232_060 0.1513534258 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001276_030 0.1804762551 - - PREDICTED: uncharacterized protein LOC104881333 [Vitis vinifera]
4 Hb_000160_010 0.1818327523 - - PREDICTED: uncharacterized protein LOC105638816 [Jatropha curcas]
5 Hb_000805_050 0.1871674165 - - zinc transporter, putative [Ricinus communis]
6 Hb_103225_040 0.1977053826 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 12-like [Jatropha curcas]
7 Hb_152868_020 0.197862593 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
8 Hb_003793_010 0.1992557863 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
9 Hb_000445_410 0.1997441076 - - hypothetical protein EUGRSUZ_F02776 [Eucalyptus grandis]
10 Hb_001269_180 0.2013285016 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
11 Hb_000007_190 0.2014170678 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 10-like [Jatropha curcas]
12 Hb_000392_500 0.2035283554 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000086_460 0.2044664477 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
14 Hb_142204_010 0.205544883 - - pyruvate decarboxylase [Saccharum officinarum]
15 Hb_011689_010 0.2066095764 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
16 Hb_000414_090 0.2069593893 - - conserved hypothetical protein [Ricinus communis]
17 Hb_033149_010 0.2082370382 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
18 Hb_008008_040 0.2086008073 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
19 Hb_000347_060 0.2097041569 - - PREDICTED: uncharacterized protein LOC105631356 [Jatropha curcas]
20 Hb_010288_010 0.2113043109 - - Beta-glucosidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000815_220 Hb_000815_220 Hb_001232_060 Hb_001232_060 Hb_000815_220--Hb_001232_060 Hb_001276_030 Hb_001276_030 Hb_000815_220--Hb_001276_030 Hb_000160_010 Hb_000160_010 Hb_000815_220--Hb_000160_010 Hb_000805_050 Hb_000805_050 Hb_000815_220--Hb_000805_050 Hb_103225_040 Hb_103225_040 Hb_000815_220--Hb_103225_040 Hb_152868_020 Hb_152868_020 Hb_000815_220--Hb_152868_020 Hb_012055_070 Hb_012055_070 Hb_001232_060--Hb_012055_070 Hb_001232_060--Hb_000160_010 Hb_001269_180 Hb_001269_180 Hb_001232_060--Hb_001269_180 Hb_001232_060--Hb_001276_030 Hb_004586_440 Hb_004586_440 Hb_001232_060--Hb_004586_440 Hb_001276_030--Hb_000160_010 Hb_000633_030 Hb_000633_030 Hb_001276_030--Hb_000633_030 Hb_001276_030--Hb_001269_180 Hb_001456_030 Hb_001456_030 Hb_001276_030--Hb_001456_030 Hb_011082_030 Hb_011082_030 Hb_001276_030--Hb_011082_030 Hb_000160_010--Hb_001269_180 Hb_001369_480 Hb_001369_480 Hb_000160_010--Hb_001369_480 Hb_000160_010--Hb_004586_440 Hb_000160_010--Hb_000633_030 Hb_006634_120 Hb_006634_120 Hb_000805_050--Hb_006634_120 Hb_000037_150 Hb_000037_150 Hb_000805_050--Hb_000037_150 Hb_005056_040 Hb_005056_040 Hb_000805_050--Hb_005056_040 Hb_064445_040 Hb_064445_040 Hb_000805_050--Hb_064445_040 Hb_001477_050 Hb_001477_050 Hb_000805_050--Hb_001477_050 Hb_024074_030 Hb_024074_030 Hb_000805_050--Hb_024074_030 Hb_103225_040--Hb_152868_020 Hb_003793_010 Hb_003793_010 Hb_103225_040--Hb_003793_010 Hb_000445_410 Hb_000445_410 Hb_103225_040--Hb_000445_410 Hb_000007_190 Hb_000007_190 Hb_103225_040--Hb_000007_190 Hb_000392_500 Hb_000392_500 Hb_103225_040--Hb_000392_500 Hb_033149_010 Hb_033149_010 Hb_103225_040--Hb_033149_010 Hb_152868_020--Hb_003793_010 Hb_152868_020--Hb_000445_410 Hb_152868_020--Hb_000007_190 Hb_142204_010 Hb_142204_010 Hb_152868_020--Hb_142204_010 Hb_152868_020--Hb_000392_500
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0146442 0 0.0115083 0.112041 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0548021

CAGE analysis