Hb_000815_290

Information

Type -
Description -
Location Contig815: 296847-302726
Sequence    

Annotation

kegg
ID rcu:RCOM_0837770
description hypothetical protein
nr
ID XP_012067694.1
description PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067L227
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15645 PE=4 SV=1
Gene Ontology
ID GO:0005509
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59371: 298323-299032 , PASA_asmbl_59372: 300995-302598
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_290 0.0 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
2 Hb_000771_060 0.1011474038 - - PREDICTED: spermine synthase [Jatropha curcas]
3 Hb_000059_010 0.1111624342 - - amino acid binding protein, putative [Ricinus communis]
4 Hb_005054_260 0.1199591689 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A [Jatropha curcas]
5 Hb_005496_090 0.1225457153 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
6 Hb_004089_020 0.1249596888 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
7 Hb_130719_010 0.1318804556 - - V-type proton ATPase subunit E [Hevea brasiliensis]
8 Hb_001102_210 0.1333487979 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Jatropha curcas]
9 Hb_011485_020 0.1347194857 - - protein with unknown function [Ricinus communis]
10 Hb_002016_080 0.1361559854 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
11 Hb_011021_040 0.1375219118 transcription factor TF Family: Trihelix PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Jatropha curcas]
12 Hb_001016_100 0.1384170961 - - PREDICTED: V-type proton ATPase subunit E-like [Pyrus x bretschneideri]
13 Hb_000946_100 0.1387013344 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
14 Hb_000436_030 0.1396822387 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007037_020 0.1407596596 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 78 [Jatropha curcas]
16 Hb_000739_140 0.1438245859 - - PREDICTED: proteasome subunit beta type-1 [Jatropha curcas]
17 Hb_000008_400 0.1444600053 - - PREDICTED: classical arabinogalactan protein 10-like [Nicotiana tomentosiformis]
18 Hb_001979_020 0.1446954982 - - hypothetical protein OsJ_31823 [Oryza sativa Japonica Group]
19 Hb_000457_290 0.1537875122 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
20 Hb_000140_360 0.1539122153 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]

Gene co-expression network

sample Hb_000815_290 Hb_000815_290 Hb_000771_060 Hb_000771_060 Hb_000815_290--Hb_000771_060 Hb_000059_010 Hb_000059_010 Hb_000815_290--Hb_000059_010 Hb_005054_260 Hb_005054_260 Hb_000815_290--Hb_005054_260 Hb_005496_090 Hb_005496_090 Hb_000815_290--Hb_005496_090 Hb_004089_020 Hb_004089_020 Hb_000815_290--Hb_004089_020 Hb_130719_010 Hb_130719_010 Hb_000815_290--Hb_130719_010 Hb_000428_060 Hb_000428_060 Hb_000771_060--Hb_000428_060 Hb_000008_400 Hb_000008_400 Hb_000771_060--Hb_000008_400 Hb_028049_010 Hb_028049_010 Hb_000771_060--Hb_028049_010 Hb_000739_140 Hb_000739_140 Hb_000771_060--Hb_000739_140 Hb_001016_100 Hb_001016_100 Hb_000771_060--Hb_001016_100 Hb_001102_210 Hb_001102_210 Hb_000059_010--Hb_001102_210 Hb_000059_010--Hb_130719_010 Hb_002078_440 Hb_002078_440 Hb_000059_010--Hb_002078_440 Hb_001377_420 Hb_001377_420 Hb_000059_010--Hb_001377_420 Hb_000059_010--Hb_000771_060 Hb_005054_260--Hb_000739_140 Hb_009075_010 Hb_009075_010 Hb_005054_260--Hb_009075_010 Hb_001979_020 Hb_001979_020 Hb_005054_260--Hb_001979_020 Hb_003020_150 Hb_003020_150 Hb_005054_260--Hb_003020_150 Hb_000384_120 Hb_000384_120 Hb_005054_260--Hb_000384_120 Hb_000163_050 Hb_000163_050 Hb_005054_260--Hb_000163_050 Hb_005496_090--Hb_130719_010 Hb_000056_250 Hb_000056_250 Hb_005496_090--Hb_000056_250 Hb_000016_170 Hb_000016_170 Hb_005496_090--Hb_000016_170 Hb_138585_040 Hb_138585_040 Hb_005496_090--Hb_138585_040 Hb_083380_010 Hb_083380_010 Hb_005496_090--Hb_083380_010 Hb_003291_020 Hb_003291_020 Hb_005496_090--Hb_003291_020 Hb_012022_140 Hb_012022_140 Hb_004089_020--Hb_012022_140 Hb_004089_020--Hb_000739_140 Hb_004089_020--Hb_005054_260 Hb_170426_010 Hb_170426_010 Hb_004089_020--Hb_170426_010 Hb_000005_300 Hb_000005_300 Hb_004089_020--Hb_000005_300 Hb_130719_010--Hb_000056_250 Hb_130719_010--Hb_003291_020 Hb_001123_160 Hb_001123_160 Hb_130719_010--Hb_001123_160 Hb_000685_050 Hb_000685_050 Hb_130719_010--Hb_000685_050 Hb_130719_010--Hb_005054_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.763337 2.74462 4.4162 7.41933 1.07925 0.608872
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.38866 13.051 10.3771 4.39608 5.38948

CAGE analysis