Hb_000816_220

Information

Type -
Description -
Location Contig816: 227262-228623
Sequence    

Annotation

kegg
ID rcu:RCOM_0689430
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012091176.1
description PREDICTED: CBL-interacting protein kinase 18-like [Jatropha curcas]
swissprot
ID Q5W736
description CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1
trembl
ID A0A067JQ84
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_03345 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting protein kinase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000816_220 0.0 - - PREDICTED: CBL-interacting protein kinase 18-like [Jatropha curcas]
2 Hb_000329_520 0.1939621495 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
3 Hb_159305_010 0.2039206436 - - rpl2 [Jatropha curcas]
4 Hb_000699_080 0.212812666 - - PREDICTED: rubisco accumulation factor 1, chloroplastic [Jatropha curcas]
5 Hb_003336_020 0.2170846866 - - PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic [Vitis vinifera]
6 Hb_000120_900 0.2237463132 - - catalase [Hevea brasiliensis]
7 Hb_007479_030 0.223810465 - - PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 3 [Jatropha curcas]
8 Hb_073490_010 0.235895775 - - NAD(P)-linked oxidoreductase superfamily protein isoform 1 [Theobroma cacao]
9 Hb_000012_440 0.2396814105 - - PREDICTED: uncharacterized protein LOC104248335 [Nicotiana sylvestris]
10 Hb_159305_020 0.2405727093 - - 50S ribosomal protein L2-B [Medicago truncatula]
11 Hb_000043_100 0.2415635962 - - PREDICTED: uncharacterized protein LOC105797583 [Gossypium raimondii]
12 Hb_003952_050 0.2417325527 - - beta-galactosidase, putative [Ricinus communis]
13 Hb_013253_030 0.2429536415 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
14 Hb_000184_030 0.2430216002 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
15 Hb_004987_030 0.2445097321 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
16 Hb_000062_520 0.2463882585 - - conserved hypothetical protein [Ricinus communis]
17 Hb_158235_010 0.2554398028 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
18 Hb_027745_010 0.2556905338 - - 50S ribosomal protein L2, putative [Ricinus communis]
19 Hb_000329_580 0.2560298694 - - malate dehydrogenase, putative [Ricinus communis]
20 Hb_106692_020 0.2574568792 - - NADH dehydrogenase subunit F, partial (chloroplast) [Hevea sp. Gillespie 4272]

Gene co-expression network

sample Hb_000816_220 Hb_000816_220 Hb_000329_520 Hb_000329_520 Hb_000816_220--Hb_000329_520 Hb_159305_010 Hb_159305_010 Hb_000816_220--Hb_159305_010 Hb_000699_080 Hb_000699_080 Hb_000816_220--Hb_000699_080 Hb_003336_020 Hb_003336_020 Hb_000816_220--Hb_003336_020 Hb_000120_900 Hb_000120_900 Hb_000816_220--Hb_000120_900 Hb_007479_030 Hb_007479_030 Hb_000816_220--Hb_007479_030 Hb_000329_520--Hb_003336_020 Hb_000012_440 Hb_000012_440 Hb_000329_520--Hb_000012_440 Hb_012940_020 Hb_012940_020 Hb_000329_520--Hb_012940_020 Hb_000329_520--Hb_000699_080 Hb_001213_110 Hb_001213_110 Hb_000329_520--Hb_001213_110 Hb_073490_010 Hb_073490_010 Hb_159305_010--Hb_073490_010 Hb_051924_010 Hb_051924_010 Hb_159305_010--Hb_051924_010 Hb_019253_040 Hb_019253_040 Hb_159305_010--Hb_019253_040 Hb_006925_030 Hb_006925_030 Hb_159305_010--Hb_006925_030 Hb_189099_020 Hb_189099_020 Hb_159305_010--Hb_189099_020 Hb_159305_010--Hb_003336_020 Hb_002686_060 Hb_002686_060 Hb_000699_080--Hb_002686_060 Hb_000699_080--Hb_006925_030 Hb_000699_080--Hb_003336_020 Hb_000038_020 Hb_000038_020 Hb_000699_080--Hb_000038_020 Hb_000699_080--Hb_000120_900 Hb_168031_020 Hb_168031_020 Hb_000699_080--Hb_168031_020 Hb_003336_020--Hb_012940_020 Hb_028960_010 Hb_028960_010 Hb_003336_020--Hb_028960_010 Hb_000359_070 Hb_000359_070 Hb_003336_020--Hb_000359_070 Hb_003336_020--Hb_002686_060 Hb_156850_020 Hb_156850_020 Hb_003336_020--Hb_156850_020 Hb_000120_900--Hb_006925_030 Hb_000667_140 Hb_000667_140 Hb_000120_900--Hb_000667_140 Hb_000120_900--Hb_002686_060 Hb_000120_900--Hb_159305_010 Hb_000120_900--Hb_000038_020 Hb_033152_040 Hb_033152_040 Hb_007479_030--Hb_033152_040 Hb_000387_090 Hb_000387_090 Hb_007479_030--Hb_000387_090 Hb_013253_030 Hb_013253_030 Hb_007479_030--Hb_013253_030 Hb_000445_200 Hb_000445_200 Hb_007479_030--Hb_000445_200 Hb_001484_080 Hb_001484_080 Hb_007479_030--Hb_001484_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0153165 0 0.164199 0.236709 0.0440432 0.118451
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.349285 0.577031 0.205689 0.0109835 4.23563

CAGE analysis