Hb_000824_050

Information

Type -
Description -
Location Contig824: 91467-95910
Sequence    

Annotation

kegg
ID rcu:RCOM_1409980
description nicotinate phosphoribosyltransferase, putative
nr
ID XP_012079249.1
description PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
swissprot
ID Q8RWM2
description Nicotinate phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=NAPRT1 PE=2 SV=1
trembl
ID A0A067KI49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12411 PE=4 SV=1
Gene Ontology
ID GO:0016757
description nicotinate phosphoribosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000824_050 0.0 - - PREDICTED: nicotinate phosphoribosyltransferase 1 [Jatropha curcas]
2 Hb_135757_020 0.1238424627 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
3 Hb_006922_090 0.1354245641 - - PREDICTED: interaptin [Jatropha curcas]
4 Hb_023827_020 0.1446581713 - - beta-1,3-glucanase 1 [Ziziphus jujuba]
5 Hb_000679_190 0.146131384 - - PREDICTED: uncharacterized protein LOC105637641 isoform X1 [Jatropha curcas]
6 Hb_004094_020 0.149438532 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
7 Hb_001946_310 0.1496332035 - - PREDICTED: probable ethanolamine kinase isoform X2 [Jatropha curcas]
8 Hb_166053_010 0.150805329 - - glyceraldehyde-3-phosphate dehydrogenase, partial [Vernicia fordii]
9 Hb_028872_110 0.1553187783 - - PREDICTED: uncharacterized protein LOC105644776 [Jatropha curcas]
10 Hb_001318_050 0.1565381451 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
11 Hb_004330_080 0.1580336193 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Jatropha curcas]
12 Hb_001673_100 0.1642230151 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Jatropha curcas]
13 Hb_008226_070 0.1671945594 - - PREDICTED: expansin-A8 [Jatropha curcas]
14 Hb_011947_020 0.1682246047 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
15 Hb_100147_010 0.1706483491 - - PREDICTED: exosome complex component MTR3 [Jatropha curcas]
16 Hb_003226_120 0.1709578326 - - conserved hypothetical protein [Ricinus communis]
17 Hb_029510_100 0.1718939418 - - scab resistance family protein [Populus trichocarpa]
18 Hb_000221_240 0.1750012806 - - chloroplast 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Hevea brasiliensis]
19 Hb_000928_190 0.1765235886 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
20 Hb_007441_280 0.1781504706 - - hypothetical protein JCGZ_14672 [Jatropha curcas]

Gene co-expression network

sample Hb_000824_050 Hb_000824_050 Hb_135757_020 Hb_135757_020 Hb_000824_050--Hb_135757_020 Hb_006922_090 Hb_006922_090 Hb_000824_050--Hb_006922_090 Hb_023827_020 Hb_023827_020 Hb_000824_050--Hb_023827_020 Hb_000679_190 Hb_000679_190 Hb_000824_050--Hb_000679_190 Hb_004094_020 Hb_004094_020 Hb_000824_050--Hb_004094_020 Hb_001946_310 Hb_001946_310 Hb_000824_050--Hb_001946_310 Hb_135757_020--Hb_004094_020 Hb_000221_240 Hb_000221_240 Hb_135757_020--Hb_000221_240 Hb_001021_010 Hb_001021_010 Hb_135757_020--Hb_001021_010 Hb_004330_080 Hb_004330_080 Hb_135757_020--Hb_004330_080 Hb_019280_020 Hb_019280_020 Hb_135757_020--Hb_019280_020 Hb_001366_060 Hb_001366_060 Hb_006922_090--Hb_001366_060 Hb_012362_030 Hb_012362_030 Hb_006922_090--Hb_012362_030 Hb_000120_230 Hb_000120_230 Hb_006922_090--Hb_000120_230 Hb_029510_100 Hb_029510_100 Hb_006922_090--Hb_029510_100 Hb_006922_090--Hb_019280_020 Hb_000381_110 Hb_000381_110 Hb_023827_020--Hb_000381_110 Hb_100147_010 Hb_100147_010 Hb_023827_020--Hb_100147_010 Hb_001673_100 Hb_001673_100 Hb_023827_020--Hb_001673_100 Hb_005914_140 Hb_005914_140 Hb_023827_020--Hb_005914_140 Hb_003044_080 Hb_003044_080 Hb_023827_020--Hb_003044_080 Hb_000679_190--Hb_001946_310 Hb_000679_190--Hb_135757_020 Hb_000586_030 Hb_000586_030 Hb_000679_190--Hb_000586_030 Hb_001318_050 Hb_001318_050 Hb_000679_190--Hb_001318_050 Hb_003780_020 Hb_003780_020 Hb_000679_190--Hb_003780_020 Hb_183867_010 Hb_183867_010 Hb_004094_020--Hb_183867_010 Hb_004094_020--Hb_005914_140 Hb_000494_030 Hb_000494_030 Hb_004094_020--Hb_000494_030 Hb_001006_270 Hb_001006_270 Hb_004094_020--Hb_001006_270 Hb_003994_220 Hb_003994_220 Hb_004094_020--Hb_003994_220 Hb_000800_090 Hb_000800_090 Hb_001946_310--Hb_000800_090 Hb_001799_060 Hb_001799_060 Hb_001946_310--Hb_001799_060 Hb_000402_130 Hb_000402_130 Hb_001946_310--Hb_000402_130 Hb_001946_310--Hb_001318_050 Hb_003305_020 Hb_003305_020 Hb_001946_310--Hb_003305_020 Hb_000025_190 Hb_000025_190 Hb_001946_310--Hb_000025_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.157833 0.730278 0.57361 4.0159 0.549603 0.674744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.28935 0.63351 1.13077 4.12363 1.12804

CAGE analysis