Hb_000827_080

Information

Type -
Description -
Location Contig827: 121801-122766
Sequence    

Annotation

kegg
ID rcu:RCOM_1630050
description catalytic, putative
nr
ID XP_002526230.1
description catalytic, putative [Ricinus communis]
swissprot
ID Q9SX78
description Probable carboxylesterase 2 OS=Arabidopsis thaliana GN=CXE2 PE=2 SV=1
trembl
ID B9SJR1
description Catalytic, putative OS=Ricinus communis GN=RCOM_1630050 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59738: 121762-122917
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000827_080 0.0 - - catalytic, putative [Ricinus communis]
2 Hb_005228_120 0.1242058972 - - phospholipase d beta, putative [Ricinus communis]
3 Hb_001357_190 0.1292200316 - - ribonuclease III, putative [Ricinus communis]
4 Hb_007441_070 0.1300628931 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
5 Hb_006002_030 0.1348482812 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
6 Hb_001433_190 0.134982879 - - PREDICTED: eukaryotic translation initiation factor 3 subunit A [Jatropha curcas]
7 Hb_000608_340 0.1408589712 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Populus euphratica]
8 Hb_001278_060 0.1411368842 - - nucleotide binding protein, putative [Ricinus communis]
9 Hb_000025_310 0.1423621022 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009421_030 0.1435061278 - - PREDICTED: uncharacterized protein LOC105639700 [Jatropha curcas]
11 Hb_000120_570 0.1440154046 - - Mlo protein [Hevea brasiliensis]
12 Hb_000940_040 0.1444991864 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
13 Hb_005322_030 0.1450421535 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
14 Hb_000395_140 0.1457869095 - - Oligopeptide transporter, putative [Ricinus communis]
15 Hb_078477_040 0.1482901253 - - nuclear movement protein nudc, putative [Ricinus communis]
16 Hb_000406_040 0.148650739 - - PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like protein 5 [Jatropha curcas]
17 Hb_000779_040 0.1496990332 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
18 Hb_109168_010 0.1499388102 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
19 Hb_005295_040 0.1504863963 - - PREDICTED: polyadenylate-binding protein RBP47-like [Jatropha curcas]
20 Hb_002374_150 0.1508905475 - - PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000827_080 Hb_000827_080 Hb_005228_120 Hb_005228_120 Hb_000827_080--Hb_005228_120 Hb_001357_190 Hb_001357_190 Hb_000827_080--Hb_001357_190 Hb_007441_070 Hb_007441_070 Hb_000827_080--Hb_007441_070 Hb_006002_030 Hb_006002_030 Hb_000827_080--Hb_006002_030 Hb_001433_190 Hb_001433_190 Hb_000827_080--Hb_001433_190 Hb_000608_340 Hb_000608_340 Hb_000827_080--Hb_000608_340 Hb_000940_040 Hb_000940_040 Hb_005228_120--Hb_000940_040 Hb_000173_210 Hb_000173_210 Hb_005228_120--Hb_000173_210 Hb_001946_360 Hb_001946_360 Hb_005228_120--Hb_001946_360 Hb_000540_140 Hb_000540_140 Hb_005228_120--Hb_000540_140 Hb_005228_120--Hb_000608_340 Hb_001357_190--Hb_007441_070 Hb_002405_020 Hb_002405_020 Hb_001357_190--Hb_002405_020 Hb_000395_140 Hb_000395_140 Hb_001357_190--Hb_000395_140 Hb_002675_190 Hb_002675_190 Hb_001357_190--Hb_002675_190 Hb_002149_040 Hb_002149_040 Hb_001357_190--Hb_002149_040 Hb_153547_010 Hb_153547_010 Hb_001357_190--Hb_153547_010 Hb_007441_070--Hb_000940_040 Hb_011644_020 Hb_011644_020 Hb_007441_070--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007441_070--Hb_019871_020 Hb_001582_030 Hb_001582_030 Hb_007441_070--Hb_001582_030 Hb_000152_890 Hb_000152_890 Hb_007441_070--Hb_000152_890 Hb_078477_040 Hb_078477_040 Hb_006002_030--Hb_078477_040 Hb_001278_060 Hb_001278_060 Hb_006002_030--Hb_001278_060 Hb_006829_090 Hb_006829_090 Hb_006002_030--Hb_006829_090 Hb_000213_070 Hb_000213_070 Hb_006002_030--Hb_000213_070 Hb_003018_160 Hb_003018_160 Hb_006002_030--Hb_003018_160 Hb_002235_320 Hb_002235_320 Hb_006002_030--Hb_002235_320 Hb_001433_190--Hb_001278_060 Hb_005129_050 Hb_005129_050 Hb_001433_190--Hb_005129_050 Hb_002883_010 Hb_002883_010 Hb_001433_190--Hb_002883_010 Hb_007849_020 Hb_007849_020 Hb_001433_190--Hb_007849_020 Hb_001196_070 Hb_001196_070 Hb_001433_190--Hb_001196_070 Hb_001433_190--Hb_006002_030 Hb_000779_040 Hb_000779_040 Hb_000608_340--Hb_000779_040 Hb_000608_340--Hb_019871_020 Hb_002374_150 Hb_002374_150 Hb_000608_340--Hb_002374_150 Hb_003666_050 Hb_003666_050 Hb_000608_340--Hb_003666_050 Hb_000619_070 Hb_000619_070 Hb_000608_340--Hb_000619_070 Hb_035360_010 Hb_035360_010 Hb_000608_340--Hb_035360_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.5265 21.7323 12.2438 6.09763 100.727 68.587
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0542 9.11425 22.7744 28.024 4.16122

CAGE analysis