Hb_000830_020

Information

Type -
Description -
Location Contig830: 50064-56288
Sequence    

Annotation

kegg
ID cit:102609888
description 7-methylguanosine phosphate-specific 5'-nucleotidase A-like
nr
ID XP_012072020.1
description PREDICTED: 7-methylguanosine phosphate-specific 5'-nucleotidase A isoform X2 [Jatropha curcas]
swissprot
ID Q7SYN4
description Cytosolic 5'-nucleotidase 3 OS=Danio rerio GN=nt5c3 PE=2 SV=2
trembl
ID A0A067L1G3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05755 PE=4 SV=1
Gene Ontology
ID GO:0005829
description 7-methylguanosine phosphate-specific 5 -nucleotidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59804: 50063-56252
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000830_020 0.0 - - PREDICTED: 7-methylguanosine phosphate-specific 5'-nucleotidase A isoform X2 [Jatropha curcas]
2 Hb_133004_010 0.0875988717 - - PREDICTED: cyclin-D3-3 [Jatropha curcas]
3 Hb_007483_070 0.0957504733 - - PREDICTED: intersectin-1 isoform X1 [Populus euphratica]
4 Hb_000163_260 0.0981981333 - - PREDICTED: uncharacterized protein LOC105642518 [Jatropha curcas]
5 Hb_001279_190 0.0992087173 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X1 [Jatropha curcas]
6 Hb_006570_160 0.1018948738 - - PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Jatropha curcas]
7 Hb_000227_390 0.1030696339 - - PREDICTED: vacuole membrane protein KMS1 isoform X2 [Jatropha curcas]
8 Hb_001227_120 0.1033963546 transcription factor TF Family: C2H2 Histone deacetylase 2a, putative [Ricinus communis]
9 Hb_005946_150 0.1048564247 - - PREDICTED: DNA mismatch repair protein MSH7 [Jatropha curcas]
10 Hb_008304_020 0.107586732 - - PREDICTED: ATP-dependent RNA helicase DBP2-like [Jatropha curcas]
11 Hb_000926_060 0.111664085 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000579_080 0.1119379096 - - PREDICTED: 26S protease regulatory subunit S10B homolog B [Jatropha curcas]
13 Hb_000120_890 0.1119438715 - - PREDICTED: phosphoinositide phosphatase SAC6 [Jatropha curcas]
14 Hb_003605_020 0.1154633352 - - exocyst complex component sec6, putative [Ricinus communis]
15 Hb_006775_120 0.1158884143 - - exonuclease-like protein [Oryza sativa Japonica Group]
16 Hb_009476_130 0.11597502 - - hypothetical protein VITISV_005430 [Vitis vinifera]
17 Hb_000160_070 0.1160878476 - - PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]
18 Hb_001504_010 0.1172855524 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
19 Hb_159809_070 0.1190780903 - - phospholipase A-2-activating protein, putative [Ricinus communis]
20 Hb_011716_010 0.1193621496 - - PREDICTED: probable protein arginine N-methyltransferase 1.2 [Jatropha curcas]

Gene co-expression network

sample Hb_000830_020 Hb_000830_020 Hb_133004_010 Hb_133004_010 Hb_000830_020--Hb_133004_010 Hb_007483_070 Hb_007483_070 Hb_000830_020--Hb_007483_070 Hb_000163_260 Hb_000163_260 Hb_000830_020--Hb_000163_260 Hb_001279_190 Hb_001279_190 Hb_000830_020--Hb_001279_190 Hb_006570_160 Hb_006570_160 Hb_000830_020--Hb_006570_160 Hb_000227_390 Hb_000227_390 Hb_000830_020--Hb_000227_390 Hb_001482_050 Hb_001482_050 Hb_133004_010--Hb_001482_050 Hb_001660_100 Hb_001660_100 Hb_133004_010--Hb_001660_100 Hb_133004_010--Hb_006570_160 Hb_001227_120 Hb_001227_120 Hb_133004_010--Hb_001227_120 Hb_005754_040 Hb_005754_040 Hb_133004_010--Hb_005754_040 Hb_007483_070--Hb_001279_190 Hb_001504_010 Hb_001504_010 Hb_007483_070--Hb_001504_010 Hb_008304_020 Hb_008304_020 Hb_007483_070--Hb_008304_020 Hb_000815_300 Hb_000815_300 Hb_007483_070--Hb_000815_300 Hb_000120_890 Hb_000120_890 Hb_007483_070--Hb_000120_890 Hb_011716_010 Hb_011716_010 Hb_007483_070--Hb_011716_010 Hb_000163_260--Hb_001504_010 Hb_001882_010 Hb_001882_010 Hb_000163_260--Hb_001882_010 Hb_012438_030 Hb_012438_030 Hb_000163_260--Hb_012438_030 Hb_009476_130 Hb_009476_130 Hb_000163_260--Hb_009476_130 Hb_001703_040 Hb_001703_040 Hb_000163_260--Hb_001703_040 Hb_000163_260--Hb_000120_890 Hb_002687_180 Hb_002687_180 Hb_001279_190--Hb_002687_180 Hb_004228_120 Hb_004228_120 Hb_001279_190--Hb_004228_120 Hb_001279_190--Hb_011716_010 Hb_001250_050 Hb_001250_050 Hb_001279_190--Hb_001250_050 Hb_001279_190--Hb_001227_120 Hb_000260_470 Hb_000260_470 Hb_006570_160--Hb_000260_470 Hb_011282_060 Hb_011282_060 Hb_006570_160--Hb_011282_060 Hb_005271_040 Hb_005271_040 Hb_006570_160--Hb_005271_040 Hb_010407_140 Hb_010407_140 Hb_006570_160--Hb_010407_140 Hb_002676_120 Hb_002676_120 Hb_006570_160--Hb_002676_120 Hb_000666_100 Hb_000666_100 Hb_006570_160--Hb_000666_100 Hb_000227_390--Hb_001279_190 Hb_000227_390--Hb_007483_070 Hb_000120_810 Hb_000120_810 Hb_000227_390--Hb_000120_810 Hb_004079_130 Hb_004079_130 Hb_000227_390--Hb_004079_130 Hb_003540_050 Hb_003540_050 Hb_000227_390--Hb_003540_050 Hb_000703_190 Hb_000703_190 Hb_000227_390--Hb_000703_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.83613 3.65029 14.064 8.87956 4.35569 4.32723
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.90629 3.87666 3.14296 7.79745 6.10668

CAGE analysis