Hb_000834_130

Information

Type -
Description -
Location Contig834: 89193-89873
Sequence    

Annotation

kegg
ID rcu:RCOM_1052780
description hypothetical protein
nr
ID XP_002514305.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RKR1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1052780 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000834_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000568_020 0.0646876051 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
3 Hb_000243_340 0.0877763729 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
4 Hb_000419_140 0.092458111 - - Aquaporin PIP2.1, putative [Ricinus communis]
5 Hb_000076_280 0.0932029838 - - PREDICTED: pectinesterase-like [Populus euphratica]
6 Hb_001645_030 0.0935021389 - - PREDICTED: probable auxin efflux carrier component 1b [Jatropha curcas]
7 Hb_002304_100 0.0946938544 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
8 Hb_027400_020 0.09689915 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]
9 Hb_002616_020 0.0985986066 - - PREDICTED: peroxidase 3 [Jatropha curcas]
10 Hb_005000_280 0.1006008836 - - PREDICTED: uncharacterized protein LOC105637905 [Jatropha curcas]
11 Hb_001247_090 0.1009505599 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
12 Hb_001777_010 0.1012502832 - - -
13 Hb_001769_070 0.1031718608 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
14 Hb_000334_090 0.1051009018 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
15 Hb_178049_010 0.1052219205 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
16 Hb_002518_020 0.1056906661 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
17 Hb_170077_020 0.1065592459 - - PREDICTED: probable serine incorporator [Jatropha curcas]
18 Hb_005214_050 0.1080734458 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
19 Hb_000352_360 0.1117462664 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
20 Hb_027405_010 0.1132986591 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]

Gene co-expression network

sample Hb_000834_130 Hb_000834_130 Hb_000568_020 Hb_000568_020 Hb_000834_130--Hb_000568_020 Hb_000243_340 Hb_000243_340 Hb_000834_130--Hb_000243_340 Hb_000419_140 Hb_000419_140 Hb_000834_130--Hb_000419_140 Hb_000076_280 Hb_000076_280 Hb_000834_130--Hb_000076_280 Hb_001645_030 Hb_001645_030 Hb_000834_130--Hb_001645_030 Hb_002304_100 Hb_002304_100 Hb_000834_130--Hb_002304_100 Hb_000568_020--Hb_002304_100 Hb_000568_020--Hb_000243_340 Hb_001247_090 Hb_001247_090 Hb_000568_020--Hb_001247_090 Hb_005214_050 Hb_005214_050 Hb_000568_020--Hb_005214_050 Hb_004031_050 Hb_004031_050 Hb_000568_020--Hb_004031_050 Hb_000243_340--Hb_002304_100 Hb_002601_040 Hb_002601_040 Hb_000243_340--Hb_002601_040 Hb_000243_340--Hb_001645_030 Hb_000339_050 Hb_000339_050 Hb_000243_340--Hb_000339_050 Hb_000419_140--Hb_000076_280 Hb_001777_010 Hb_001777_010 Hb_000419_140--Hb_001777_010 Hb_027400_020 Hb_027400_020 Hb_000419_140--Hb_027400_020 Hb_001769_070 Hb_001769_070 Hb_000419_140--Hb_001769_070 Hb_000329_010 Hb_000329_010 Hb_000419_140--Hb_000329_010 Hb_002616_020 Hb_002616_020 Hb_000419_140--Hb_002616_020 Hb_000076_280--Hb_027400_020 Hb_000076_280--Hb_001769_070 Hb_000076_280--Hb_000329_010 Hb_000076_280--Hb_002616_020 Hb_002809_080 Hb_002809_080 Hb_000076_280--Hb_002809_080 Hb_001645_030--Hb_002304_100 Hb_024868_010 Hb_024868_010 Hb_001645_030--Hb_024868_010 Hb_001645_030--Hb_002601_040 Hb_001645_030--Hb_000568_020 Hb_002304_100--Hb_001247_090 Hb_002304_100--Hb_000339_050 Hb_002304_100--Hb_002601_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.44288 1.01699 3.6577 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.753934 0.521078

CAGE analysis