Hb_000834_160

Information

Type -
Description -
Location Contig834: 114958-118813
Sequence    

Annotation

kegg
ID rcu:RCOM_1052800
description monooxygenase, putative (EC:1.14.13.8)
nr
ID KDP33668.1
description hypothetical protein JCGZ_07239 [Jatropha curcas]
swissprot
ID Q9SVQ1
description Indole-3-pyruvate monooxygenase YUCCA2 OS=Arabidopsis thaliana GN=YUC2 PE=1 SV=1
trembl
ID A0A067KFA8
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_07239 PE=3 SV=1
Gene Ontology
ID GO:0004499
description indole-3-pyruvate monooxygenase yucca2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000834_160 0.0 - - hypothetical protein JCGZ_07239 [Jatropha curcas]
2 Hb_003598_070 0.0182344334 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002284_290 0.0315777642 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
4 Hb_003836_040 0.0372187617 - - PREDICTED: cytochrome P450 77A3-like [Jatropha curcas]
5 Hb_147976_010 0.0411547252 - - -
6 Hb_004464_040 0.0412142293 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
7 Hb_009692_050 0.0429430531 - - -
8 Hb_002965_170 0.0435172751 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
9 Hb_000297_190 0.0455116613 - - cell wall invertase [Manihot esculenta]
10 Hb_003605_170 0.0492869166 - - hypothetical protein POPTR_0013s12020g [Populus trichocarpa]
11 Hb_000210_020 0.0531333124 transcription factor TF Family: OFP Ovate family protein 13, putative [Theobroma cacao]
12 Hb_145502_010 0.0534242957 transcription factor TF Family: MYB PREDICTED: transcription factor MYB82-like [Jatropha curcas]
13 Hb_001205_140 0.055317313 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
14 Hb_014056_020 0.0565673154 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000018_110 0.0576061866 - - hypothetical protein POPTR_0018s00370g [Populus trichocarpa]
16 Hb_000174_120 0.057669316 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
17 Hb_005888_020 0.0603946577 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
18 Hb_002304_030 0.0608381181 - - hypothetical protein JCGZ_21517 [Jatropha curcas]
19 Hb_001519_140 0.0611758981 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis vinifera]
20 Hb_031862_210 0.0620769922 - - hypothetical protein JCGZ_24955 [Jatropha curcas]

Gene co-expression network

sample Hb_000834_160 Hb_000834_160 Hb_003598_070 Hb_003598_070 Hb_000834_160--Hb_003598_070 Hb_002284_290 Hb_002284_290 Hb_000834_160--Hb_002284_290 Hb_003836_040 Hb_003836_040 Hb_000834_160--Hb_003836_040 Hb_147976_010 Hb_147976_010 Hb_000834_160--Hb_147976_010 Hb_004464_040 Hb_004464_040 Hb_000834_160--Hb_004464_040 Hb_009692_050 Hb_009692_050 Hb_000834_160--Hb_009692_050 Hb_003598_070--Hb_147976_010 Hb_003598_070--Hb_002284_290 Hb_003598_070--Hb_009692_050 Hb_003598_070--Hb_003836_040 Hb_145502_010 Hb_145502_010 Hb_003598_070--Hb_145502_010 Hb_002284_290--Hb_009692_050 Hb_002284_290--Hb_003836_040 Hb_002284_290--Hb_147976_010 Hb_003605_170 Hb_003605_170 Hb_002284_290--Hb_003605_170 Hb_003836_040--Hb_003605_170 Hb_000210_020 Hb_000210_020 Hb_003836_040--Hb_000210_020 Hb_000174_120 Hb_000174_120 Hb_003836_040--Hb_000174_120 Hb_005797_020 Hb_005797_020 Hb_003836_040--Hb_005797_020 Hb_031862_210 Hb_031862_210 Hb_147976_010--Hb_031862_210 Hb_147976_010--Hb_009692_050 Hb_147976_010--Hb_145502_010 Hb_004464_040--Hb_000210_020 Hb_004464_040--Hb_003598_070 Hb_002965_170 Hb_002965_170 Hb_004464_040--Hb_002965_170 Hb_004464_040--Hb_002284_290 Hb_000297_190 Hb_000297_190 Hb_004464_040--Hb_000297_190 Hb_001433_210 Hb_001433_210 Hb_009692_050--Hb_001433_210 Hb_009692_050--Hb_000174_120 Hb_000414_040 Hb_000414_040 Hb_009692_050--Hb_000414_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.753059 0.220046 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.672824

CAGE analysis