Hb_000836_090

Information

Type -
Description -
Location Contig836: 107848-110767
Sequence    

Annotation

kegg
ID vvi:100261848
description calmodulin-binding receptor-like cytoplasmic kinase 2
nr
ID XP_012083346.1
description PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
swissprot
ID Q8VZJ9
description Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana GN=CRCK2 PE=2 SV=1
trembl
ID A0A067JXA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14372 PE=3 SV=1
Gene Ontology
ID GO:0004674
description calmodulin-binding receptor-like cytoplasmic kinase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59919: 107927-108790
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_090 0.0 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
2 Hb_033006_020 0.0779046711 - - Aspartate aminotransferase, putative [Ricinus communis]
3 Hb_002053_180 0.0914267468 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
4 Hb_007130_020 0.0947747474 - - -
5 Hb_000905_100 0.0948911863 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
6 Hb_000002_370 0.0964918203 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
7 Hb_000199_040 0.1034504822 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
8 Hb_000103_370 0.1034950534 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
9 Hb_000465_020 0.1066045987 - - PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
10 Hb_006922_020 0.1077541926 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
11 Hb_001141_350 0.1088617565 - - hypothetical protein JCGZ_02174 [Jatropha curcas]
12 Hb_000645_260 0.1112190204 - - PREDICTED: uncharacterized protein LOC105643508 [Jatropha curcas]
13 Hb_003531_050 0.1120285472 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
14 Hb_000062_130 0.1148123203 - - cytochrome P450, putative [Ricinus communis]
15 Hb_044653_050 0.1156426407 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
16 Hb_000243_290 0.1156453316 - - plastidic aldolase family protein [Populus trichocarpa]
17 Hb_000049_280 0.1193945598 - - PREDICTED: ribokinase-like isoform X4 [Jatropha curcas]
18 Hb_004223_080 0.1196766221 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_002311_280 0.1197834312 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
20 Hb_001221_060 0.1207086144 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]

Gene co-expression network

sample Hb_000836_090 Hb_000836_090 Hb_033006_020 Hb_033006_020 Hb_000836_090--Hb_033006_020 Hb_002053_180 Hb_002053_180 Hb_000836_090--Hb_002053_180 Hb_007130_020 Hb_007130_020 Hb_000836_090--Hb_007130_020 Hb_000905_100 Hb_000905_100 Hb_000836_090--Hb_000905_100 Hb_000002_370 Hb_000002_370 Hb_000836_090--Hb_000002_370 Hb_000199_040 Hb_000199_040 Hb_000836_090--Hb_000199_040 Hb_000645_260 Hb_000645_260 Hb_033006_020--Hb_000645_260 Hb_002311_280 Hb_002311_280 Hb_033006_020--Hb_002311_280 Hb_001377_120 Hb_001377_120 Hb_033006_020--Hb_001377_120 Hb_033006_020--Hb_007130_020 Hb_000465_020 Hb_000465_020 Hb_033006_020--Hb_000465_020 Hb_002053_180--Hb_000199_040 Hb_000627_040 Hb_000627_040 Hb_002053_180--Hb_000627_040 Hb_007237_020 Hb_007237_020 Hb_002053_180--Hb_007237_020 Hb_006922_020 Hb_006922_020 Hb_002053_180--Hb_006922_020 Hb_002490_060 Hb_002490_060 Hb_002053_180--Hb_002490_060 Hb_044653_050 Hb_044653_050 Hb_007130_020--Hb_044653_050 Hb_007130_020--Hb_002311_280 Hb_007130_020--Hb_006922_020 Hb_004228_070 Hb_004228_070 Hb_007130_020--Hb_004228_070 Hb_000809_130 Hb_000809_130 Hb_000905_100--Hb_000809_130 Hb_000905_100--Hb_000002_370 Hb_000905_100--Hb_002053_180 Hb_000027_160 Hb_000027_160 Hb_000905_100--Hb_000027_160 Hb_000905_100--Hb_033006_020 Hb_000002_370--Hb_000199_040 Hb_000103_370 Hb_000103_370 Hb_000002_370--Hb_000103_370 Hb_003777_120 Hb_003777_120 Hb_000002_370--Hb_003777_120 Hb_000002_370--Hb_002053_180 Hb_004567_070 Hb_004567_070 Hb_000002_370--Hb_004567_070 Hb_000199_040--Hb_003777_120 Hb_000199_040--Hb_006922_020 Hb_000878_090 Hb_000878_090 Hb_000199_040--Hb_000878_090 Hb_000199_040--Hb_002490_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.20122 6.45543 19.9832 11.4069 0.333723 0.274445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.157412 0.227058 0.0389891 1.65295 9.12153

CAGE analysis