Hb_000836_100

Information

Type -
Description -
Location Contig836: 112461-114207
Sequence    

Annotation

kegg
ID rcu:RCOM_1616150
description hypothetical protein
nr
ID XP_002511889.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RDV0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1616150 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_174547_010 0.192727571 - - -
3 Hb_111985_010 0.2393531493 - - -
4 Hb_007889_050 0.3122499248 - - Kynurenine formamidase [Gossypium arboreum]
5 Hb_001506_030 0.3163142696 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
6 Hb_044653_010 0.317974751 - - PREDICTED: GTPase Era, mitochondrial [Jatropha curcas]
7 Hb_003438_060 0.327529548 - - -
8 Hb_082945_020 0.3287387713 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
9 Hb_000122_060 0.3328838158 - - PREDICTED: protein LURP-one-related 14 [Jatropha curcas]
10 Hb_000869_060 0.3348757429 - - hypothetical protein L484_003245 [Morus notabilis]
11 Hb_182823_010 0.3386973247 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
12 Hb_144550_020 0.3505544147 - - -
13 Hb_061365_010 0.3523407077 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
14 Hb_001823_080 0.3550105431 - - hypothetical protein VITISV_012142 [Vitis vinifera]
15 Hb_137515_010 0.3554742823 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Populus euphratica]
16 Hb_004361_010 0.3572266485 - - hypothetical protein CISIN_1g047084mg, partial [Citrus sinensis]
17 Hb_000035_310 0.3591501349 - - hypothetical protein POPTR_0006s28170g [Populus trichocarpa]
18 Hb_001147_080 0.3607703216 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_125948_010 0.3616482519 - - heat-shock protein, putative [Ricinus communis]
20 Hb_001950_040 0.3628310134 - - -

Gene co-expression network

sample Hb_000836_100 Hb_000836_100 Hb_174547_010 Hb_174547_010 Hb_000836_100--Hb_174547_010 Hb_111985_010 Hb_111985_010 Hb_000836_100--Hb_111985_010 Hb_007889_050 Hb_007889_050 Hb_000836_100--Hb_007889_050 Hb_001506_030 Hb_001506_030 Hb_000836_100--Hb_001506_030 Hb_044653_010 Hb_044653_010 Hb_000836_100--Hb_044653_010 Hb_003438_060 Hb_003438_060 Hb_000836_100--Hb_003438_060 Hb_027287_010 Hb_027287_010 Hb_174547_010--Hb_027287_010 Hb_106873_020 Hb_106873_020 Hb_174547_010--Hb_106873_020 Hb_000066_180 Hb_000066_180 Hb_174547_010--Hb_000066_180 Hb_174547_010--Hb_007889_050 Hb_002078_190 Hb_002078_190 Hb_174547_010--Hb_002078_190 Hb_004361_010 Hb_004361_010 Hb_111985_010--Hb_004361_010 Hb_176685_010 Hb_176685_010 Hb_111985_010--Hb_176685_010 Hb_111985_010--Hb_174547_010 Hb_003266_040 Hb_003266_040 Hb_111985_010--Hb_003266_040 Hb_000869_060 Hb_000869_060 Hb_111985_010--Hb_000869_060 Hb_007889_050--Hb_002078_190 Hb_007889_050--Hb_000869_060 Hb_000893_010 Hb_000893_010 Hb_007889_050--Hb_000893_010 Hb_072290_010 Hb_072290_010 Hb_007889_050--Hb_072290_010 Hb_007889_050--Hb_106873_020 Hb_001950_040 Hb_001950_040 Hb_007889_050--Hb_001950_040 Hb_001506_030--Hb_044653_010 Hb_163400_010 Hb_163400_010 Hb_001506_030--Hb_163400_010 Hb_186304_010 Hb_186304_010 Hb_001506_030--Hb_186304_010 Hb_076233_020 Hb_076233_020 Hb_001506_030--Hb_076233_020 Hb_000122_060 Hb_000122_060 Hb_001506_030--Hb_000122_060 Hb_014361_050 Hb_014361_050 Hb_001506_030--Hb_014361_050 Hb_125948_010 Hb_125948_010 Hb_044653_010--Hb_125948_010 Hb_044653_010--Hb_000122_060 Hb_044653_010--Hb_163400_010 Hb_070541_030 Hb_070541_030 Hb_044653_010--Hb_070541_030 Hb_044653_010--Hb_014361_050 Hb_048476_160 Hb_048476_160 Hb_003438_060--Hb_048476_160 Hb_001147_080 Hb_001147_080 Hb_003438_060--Hb_001147_080 Hb_102129_010 Hb_102129_010 Hb_003438_060--Hb_102129_010 Hb_003438_060--Hb_000122_060 Hb_005654_020 Hb_005654_020 Hb_003438_060--Hb_005654_020 Hb_145708_010 Hb_145708_010 Hb_003438_060--Hb_145708_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0371627 0 0.0427711 0.0440889 0.0654653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis