Hb_000836_220

Information

Type -
Description -
Location Contig836: 187691-189094
Sequence    

Annotation

kegg
ID rcu:RCOM_1616280
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002511902.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q66PF2
description Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1
trembl
ID B9RDW3
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1616280 PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-rhamnose:rhamnosyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_220 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_001198_160 0.0712176908 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
3 Hb_002370_060 0.0874146827 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Populus euphratica]
4 Hb_000054_140 0.0921648639 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
5 Hb_177215_020 0.0926809039 - - acc synthase, putative [Ricinus communis]
6 Hb_006573_280 0.0969039659 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
7 Hb_000028_330 0.0985105505 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
8 Hb_001310_080 0.10443653 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
9 Hb_001610_070 0.1049146005 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
10 Hb_001247_160 0.1104166233 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
11 Hb_001832_070 0.1108693651 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
12 Hb_004112_050 0.1112987189 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_096930_010 0.1185136707 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
14 Hb_006736_040 0.1216007524 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
15 Hb_026048_030 0.1258343804 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001189_150 0.1259924186 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
17 Hb_024650_010 0.1268369738 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
18 Hb_000087_200 0.1282108791 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
19 Hb_138086_010 0.1287041126 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
20 Hb_113396_010 0.1301022141 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_000836_220 Hb_000836_220 Hb_001198_160 Hb_001198_160 Hb_000836_220--Hb_001198_160 Hb_002370_060 Hb_002370_060 Hb_000836_220--Hb_002370_060 Hb_000054_140 Hb_000054_140 Hb_000836_220--Hb_000054_140 Hb_177215_020 Hb_177215_020 Hb_000836_220--Hb_177215_020 Hb_006573_280 Hb_006573_280 Hb_000836_220--Hb_006573_280 Hb_000028_330 Hb_000028_330 Hb_000836_220--Hb_000028_330 Hb_001198_160--Hb_000028_330 Hb_001610_070 Hb_001610_070 Hb_001198_160--Hb_001610_070 Hb_001198_160--Hb_177215_020 Hb_138086_010 Hb_138086_010 Hb_001198_160--Hb_138086_010 Hb_001198_160--Hb_000054_140 Hb_002370_060--Hb_000054_140 Hb_002370_060--Hb_177215_020 Hb_001248_170 Hb_001248_170 Hb_002370_060--Hb_001248_170 Hb_002370_060--Hb_006573_280 Hb_002370_060--Hb_001198_160 Hb_000054_140--Hb_006573_280 Hb_004837_110 Hb_004837_110 Hb_000054_140--Hb_004837_110 Hb_033187_020 Hb_033187_020 Hb_000054_140--Hb_033187_020 Hb_177215_020--Hb_000054_140 Hb_177215_020--Hb_138086_010 Hb_028841_010 Hb_028841_010 Hb_177215_020--Hb_028841_010 Hb_001677_120 Hb_001677_120 Hb_006573_280--Hb_001677_120 Hb_006573_280--Hb_001248_170 Hb_004112_050 Hb_004112_050 Hb_006573_280--Hb_004112_050 Hb_000028_330--Hb_001610_070 Hb_006736_040 Hb_006736_040 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_029622_090 Hb_029622_090 Hb_000028_330--Hb_029622_090 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0147885 98.2348 51.0302 63.0005 0 0.0559445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.370843 0.265219 0 15.2484 14.4399

CAGE analysis