Hb_000836_460

Information

Type -
Description -
Location Contig836: 390296-394550
Sequence    

Annotation

kegg
ID rcu:RCOM_1616700
description Proline iminopeptidase, putative (EC:3.4.11.5)
nr
ID XP_012065240.1
description PREDICTED: uncharacterized protein LOC105628435 [Jatropha curcas]
swissprot
ID P46547
description Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3
trembl
ID A0A067LH51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20925 PE=4 SV=1
Gene Ontology
ID GO:0005773
description peptidase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59978: 390491-394406
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_460 0.0 - - PREDICTED: uncharacterized protein LOC105628435 [Jatropha curcas]
2 Hb_000258_110 0.0604621288 - - PREDICTED: probable apyrase 6 isoform X1 [Jatropha curcas]
3 Hb_003544_060 0.0662627038 - - hypothetical protein JCGZ_22100 [Jatropha curcas]
4 Hb_004586_220 0.068995578 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
5 Hb_005634_010 0.0697873661 - - WD-repeat protein, putative [Ricinus communis]
6 Hb_003020_100 0.0706961911 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
7 Hb_000329_060 0.0733195455 - - chloroplast 5-enolpyruvylshikimate 3-phosphate synthase [Hevea brasiliensis]
8 Hb_102698_010 0.0733219109 - - PREDICTED: vacuolar cation/proton exchanger 5-like isoform X1 [Jatropha curcas]
9 Hb_005663_110 0.0733537697 - - PREDICTED: large proline-rich protein BAG6 isoform X2 [Jatropha curcas]
10 Hb_004037_020 0.07380541 - - PREDICTED: uncharacterized protein LOC105632366 isoform X1 [Jatropha curcas]
11 Hb_000140_290 0.0744384473 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 [Populus euphratica]
12 Hb_002968_080 0.0745925248 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
13 Hb_006189_020 0.0754535973 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
14 Hb_065500_020 0.0767906997 - - Exocyst complex component sec3A isoform 1 [Theobroma cacao]
15 Hb_000580_120 0.0769289731 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
16 Hb_000120_280 0.0769980997 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
17 Hb_001828_180 0.0781899666 - - 26S proteasome regulatory subunit S3, putative [Ricinus communis]
18 Hb_001301_150 0.0786313225 - - PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
19 Hb_000477_050 0.0788881503 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Jatropha curcas]
20 Hb_000011_060 0.0790256386 - - PREDICTED: exportin-7 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000836_460 Hb_000836_460 Hb_000258_110 Hb_000258_110 Hb_000836_460--Hb_000258_110 Hb_003544_060 Hb_003544_060 Hb_000836_460--Hb_003544_060 Hb_004586_220 Hb_004586_220 Hb_000836_460--Hb_004586_220 Hb_005634_010 Hb_005634_010 Hb_000836_460--Hb_005634_010 Hb_003020_100 Hb_003020_100 Hb_000836_460--Hb_003020_100 Hb_000329_060 Hb_000329_060 Hb_000836_460--Hb_000329_060 Hb_001141_310 Hb_001141_310 Hb_000258_110--Hb_001141_310 Hb_086063_020 Hb_086063_020 Hb_000258_110--Hb_086063_020 Hb_000238_030 Hb_000238_030 Hb_000258_110--Hb_000238_030 Hb_000215_300 Hb_000215_300 Hb_000258_110--Hb_000215_300 Hb_004037_020 Hb_004037_020 Hb_000258_110--Hb_004037_020 Hb_005918_010 Hb_005918_010 Hb_003544_060--Hb_005918_010 Hb_002456_010 Hb_002456_010 Hb_003544_060--Hb_002456_010 Hb_003906_200 Hb_003906_200 Hb_003544_060--Hb_003906_200 Hb_002234_090 Hb_002234_090 Hb_003544_060--Hb_002234_090 Hb_011618_090 Hb_011618_090 Hb_003544_060--Hb_011618_090 Hb_020378_030 Hb_020378_030 Hb_004586_220--Hb_020378_030 Hb_001814_030 Hb_001814_030 Hb_004586_220--Hb_001814_030 Hb_000537_050 Hb_000537_050 Hb_004586_220--Hb_000537_050 Hb_000170_090 Hb_000170_090 Hb_004586_220--Hb_000170_090 Hb_000138_100 Hb_000138_100 Hb_004586_220--Hb_000138_100 Hb_000441_220 Hb_000441_220 Hb_004586_220--Hb_000441_220 Hb_000556_120 Hb_000556_120 Hb_005634_010--Hb_000556_120 Hb_000140_290 Hb_000140_290 Hb_005634_010--Hb_000140_290 Hb_005634_010--Hb_000329_060 Hb_000011_060 Hb_000011_060 Hb_005634_010--Hb_000011_060 Hb_005634_010--Hb_003544_060 Hb_000322_080 Hb_000322_080 Hb_003020_100--Hb_000322_080 Hb_006006_040 Hb_006006_040 Hb_003020_100--Hb_006006_040 Hb_001500_100 Hb_001500_100 Hb_003020_100--Hb_001500_100 Hb_000085_450 Hb_000085_450 Hb_003020_100--Hb_000085_450 Hb_021165_010 Hb_021165_010 Hb_003020_100--Hb_021165_010 Hb_000329_060--Hb_000556_120 Hb_000381_120 Hb_000381_120 Hb_000329_060--Hb_000381_120 Hb_000329_060--Hb_000140_290 Hb_005357_160 Hb_005357_160 Hb_000329_060--Hb_005357_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.11017 8.43975 8.91535 10.978 6.58732 6.67648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.87328 4.95966 6.6829 13.738 8.38224

CAGE analysis