Hb_000836_590

Information

Type -
Description -
Location Contig836: 463801-464648
Sequence    

Annotation

kegg
ID cic:CICLE_v10024434mg
description hypothetical protein
nr
ID KDP28547.1
description hypothetical protein JCGZ_14318 [Jatropha curcas]
swissprot
ID P29060
description Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1
trembl
ID A0A067JXD3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14318 PE=3 SV=1
Gene Ontology
ID GO:0016798
description hevamine-a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59993: 462836-463240
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_590 0.0 - - hypothetical protein JCGZ_14318 [Jatropha curcas]
2 Hb_000389_250 0.1497617602 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21556 [Jatropha curcas]
3 Hb_181810_010 0.1752470596 - - hypothetical protein JCGZ_14167 [Jatropha curcas]
4 Hb_006395_020 0.1866491398 - - hypothetical protein RCOM_0725510 [Ricinus communis]
5 Hb_000111_220 0.1879688875 - - unnamed protein product [Vitis vinifera]
6 Hb_001405_250 0.2033774654 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
7 Hb_002205_260 0.2062430836 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
8 Hb_116352_010 0.2126143401 - - kinase, putative [Ricinus communis]
9 Hb_047955_010 0.2160770695 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
10 Hb_167186_010 0.2164972489 - - cation-transporting atpase plant, putative [Ricinus communis]
11 Hb_004032_220 0.2166862622 - - Calmodulin, putative [Ricinus communis]
12 Hb_106810_010 0.2168681706 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_001846_040 0.2183183606 - - cytochrome P450, putative [Ricinus communis]
14 Hb_003582_020 0.219636026 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
15 Hb_003119_030 0.2201974506 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
16 Hb_067028_010 0.2212553378 - - BnaC03g72040D [Brassica napus]
17 Hb_012545_080 0.2221065549 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
18 Hb_051450_010 0.2238048015 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001289_030 0.224182536 - - syntaxin, plant, putative [Ricinus communis]
20 Hb_009683_010 0.2249278231 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_000836_590 Hb_000836_590 Hb_000389_250 Hb_000389_250 Hb_000836_590--Hb_000389_250 Hb_181810_010 Hb_181810_010 Hb_000836_590--Hb_181810_010 Hb_006395_020 Hb_006395_020 Hb_000836_590--Hb_006395_020 Hb_000111_220 Hb_000111_220 Hb_000836_590--Hb_000111_220 Hb_001405_250 Hb_001405_250 Hb_000836_590--Hb_001405_250 Hb_002205_260 Hb_002205_260 Hb_000836_590--Hb_002205_260 Hb_051450_010 Hb_051450_010 Hb_000389_250--Hb_051450_010 Hb_000389_250--Hb_002205_260 Hb_055706_010 Hb_055706_010 Hb_000389_250--Hb_055706_010 Hb_089140_020 Hb_089140_020 Hb_000389_250--Hb_089140_020 Hb_025030_010 Hb_025030_010 Hb_000389_250--Hb_025030_010 Hb_010964_010 Hb_010964_010 Hb_181810_010--Hb_010964_010 Hb_000819_040 Hb_000819_040 Hb_181810_010--Hb_000819_040 Hb_004032_220 Hb_004032_220 Hb_181810_010--Hb_004032_220 Hb_000340_060 Hb_000340_060 Hb_181810_010--Hb_000340_060 Hb_000059_260 Hb_000059_260 Hb_181810_010--Hb_000059_260 Hb_002960_100 Hb_002960_100 Hb_181810_010--Hb_002960_100 Hb_000302_150 Hb_000302_150 Hb_006395_020--Hb_000302_150 Hb_006395_020--Hb_001405_250 Hb_067028_010 Hb_067028_010 Hb_006395_020--Hb_067028_010 Hb_012404_050 Hb_012404_050 Hb_006395_020--Hb_012404_050 Hb_167186_010 Hb_167186_010 Hb_006395_020--Hb_167186_010 Hb_001922_100 Hb_001922_100 Hb_006395_020--Hb_001922_100 Hb_000893_050 Hb_000893_050 Hb_000111_220--Hb_000893_050 Hb_004785_120 Hb_004785_120 Hb_000111_220--Hb_004785_120 Hb_001021_110 Hb_001021_110 Hb_000111_220--Hb_001021_110 Hb_055147_010 Hb_055147_010 Hb_000111_220--Hb_055147_010 Hb_000438_040 Hb_000438_040 Hb_000111_220--Hb_000438_040 Hb_074672_010 Hb_074672_010 Hb_001405_250--Hb_074672_010 Hb_000025_490 Hb_000025_490 Hb_001405_250--Hb_000025_490 Hb_001405_250--Hb_067028_010 Hb_001846_030 Hb_001846_030 Hb_001405_250--Hb_001846_030 Hb_002119_030 Hb_002119_030 Hb_001405_250--Hb_002119_030 Hb_007407_010 Hb_007407_010 Hb_002205_260--Hb_007407_010 Hb_000133_060 Hb_000133_060 Hb_002205_260--Hb_000133_060 Hb_012545_080 Hb_012545_080 Hb_002205_260--Hb_012545_080 Hb_001289_030 Hb_001289_030 Hb_002205_260--Hb_001289_030 Hb_002660_090 Hb_002660_090 Hb_002205_260--Hb_002660_090 Hb_002205_260--Hb_089140_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.485297 0.199567 0.0449582 0.0422288 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0313338 0

CAGE analysis