Hb_000844_090

Information

Type -
Description -
Location Contig844: 101505-112530
Sequence    

Annotation

kegg
ID rcu:RCOM_1592660
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012071740.1
description PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
swissprot
ID Q9SZ46
description Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1
trembl
ID A0A067L2T9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04349 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 82c4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60184: 104675-105037 , PASA_asmbl_60185: 105188-106163
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000844_090 0.0 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
2 Hb_001004_130 0.0801570984 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
3 Hb_001300_140 0.1062957341 - - -
4 Hb_011440_010 0.1083439844 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
5 Hb_001005_210 0.1123117721 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
6 Hb_005333_210 0.11718201 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
7 Hb_004586_110 0.1203254232 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
8 Hb_000457_130 0.1212860072 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
9 Hb_009812_010 0.1242344678 - - ABC transporter family protein [Hevea brasiliensis]
10 Hb_006916_020 0.128125018 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
11 Hb_000484_040 0.1290109613 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
12 Hb_032631_080 0.1334058945 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
13 Hb_106321_010 0.1334362738 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
14 Hb_000753_180 0.1383006374 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
15 Hb_001597_110 0.1388582648 - - -
16 Hb_009150_060 0.1408694696 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
17 Hb_079394_010 0.1434807108 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
18 Hb_004519_010 0.1444031021 - - PREDICTED: basic form of pathogenesis-related protein 1-like [Jatropha curcas]
19 Hb_008376_020 0.1449064579 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
20 Hb_005168_030 0.1449647798 - - unknown [Zea mays]

Gene co-expression network

sample Hb_000844_090 Hb_000844_090 Hb_001004_130 Hb_001004_130 Hb_000844_090--Hb_001004_130 Hb_001300_140 Hb_001300_140 Hb_000844_090--Hb_001300_140 Hb_011440_010 Hb_011440_010 Hb_000844_090--Hb_011440_010 Hb_001005_210 Hb_001005_210 Hb_000844_090--Hb_001005_210 Hb_005333_210 Hb_005333_210 Hb_000844_090--Hb_005333_210 Hb_004586_110 Hb_004586_110 Hb_000844_090--Hb_004586_110 Hb_008376_020 Hb_008376_020 Hb_001004_130--Hb_008376_020 Hb_006573_250 Hb_006573_250 Hb_001004_130--Hb_006573_250 Hb_079394_010 Hb_079394_010 Hb_001004_130--Hb_079394_010 Hb_001004_130--Hb_001005_210 Hb_001004_130--Hb_001300_140 Hb_001300_140--Hb_011440_010 Hb_009150_060 Hb_009150_060 Hb_001300_140--Hb_009150_060 Hb_000836_260 Hb_000836_260 Hb_001300_140--Hb_000836_260 Hb_000753_180 Hb_000753_180 Hb_001300_140--Hb_000753_180 Hb_001300_140--Hb_005333_210 Hb_123560_020 Hb_123560_020 Hb_011440_010--Hb_123560_020 Hb_011440_010--Hb_009150_060 Hb_005168_030 Hb_005168_030 Hb_011440_010--Hb_005168_030 Hb_011440_010--Hb_000753_180 Hb_001358_120 Hb_001358_120 Hb_011440_010--Hb_001358_120 Hb_000075_030 Hb_000075_030 Hb_001005_210--Hb_000075_030 Hb_032631_080 Hb_032631_080 Hb_001005_210--Hb_032631_080 Hb_000484_040 Hb_000484_040 Hb_001005_210--Hb_000484_040 Hb_001691_060 Hb_001691_060 Hb_001005_210--Hb_001691_060 Hb_000336_280 Hb_000336_280 Hb_005333_210--Hb_000336_280 Hb_005333_210--Hb_079394_010 Hb_000215_130 Hb_000215_130 Hb_005333_210--Hb_000215_130 Hb_005333_210--Hb_000753_180 Hb_005333_210--Hb_001004_130 Hb_000471_010 Hb_000471_010 Hb_004586_110--Hb_000471_010 Hb_000684_490 Hb_000684_490 Hb_004586_110--Hb_000684_490 Hb_011861_020 Hb_011861_020 Hb_004586_110--Hb_011861_020 Hb_009812_010 Hb_009812_010 Hb_004586_110--Hb_009812_010 Hb_004586_110--Hb_009150_060 Hb_004586_110--Hb_005168_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.379114 1.99206 0.647575 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0223142 5.51293 1.74213

CAGE analysis