Hb_000846_020

Information

Type -
Description -
Location Contig846: 57392-59141
Sequence    

Annotation

kegg
ID rcu:RCOM_1313250
description cytochrome P450, putative (EC:1.14.13.21)
nr
ID XP_002518911.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9ZNR0
description Cytochrome P450 78A6 OS=Arabidopsis thaliana GN=CYP78A6 PE=2 SV=1
trembl
ID B9RYU2
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1313250 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000846_020 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001821_070 0.0642542646 - - Uncharacterized protein TCM_038456 [Theobroma cacao]
3 Hb_000876_060 0.07450703 - - conserved hypothetical protein [Ricinus communis]
4 Hb_015473_020 0.1067786153 - - hypothetical protein B456_001G090400 [Gossypium raimondii]
5 Hb_005529_050 0.1085542304 - - PREDICTED: cytochrome P450 94B3-like [Nelumbo nucifera]
6 Hb_004096_040 0.1113730264 - - cytochrome P450, putative [Ricinus communis]
7 Hb_028487_080 0.1183395125 - - Pectinesterase-1 precursor, putative [Ricinus communis]
8 Hb_002864_040 0.1387557887 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
9 Hb_027556_080 0.1419915873 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Jatropha curcas]
10 Hb_000395_160 0.1474620915 - - hypothetical protein POPTR_0006s25490g [Populus trichocarpa]
11 Hb_000979_270 0.148940704 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
12 Hb_000004_150 0.1512131656 - - hypothetical protein RCOM_1382630 [Ricinus communis]
13 Hb_000007_170 0.1512131656 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
14 Hb_000010_280 0.1512131656 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
15 Hb_000022_220 0.1512131656 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
16 Hb_000045_120 0.1512131656 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
17 Hb_000056_320 0.1512131656 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
18 Hb_000066_110 0.1512131656 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
19 Hb_000072_270 0.1512131656 - - JHL22C18.10 [Jatropha curcas]
20 Hb_000078_110 0.1512131656 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]

Gene co-expression network

sample Hb_000846_020 Hb_000846_020 Hb_001821_070 Hb_001821_070 Hb_000846_020--Hb_001821_070 Hb_000876_060 Hb_000876_060 Hb_000846_020--Hb_000876_060 Hb_015473_020 Hb_015473_020 Hb_000846_020--Hb_015473_020 Hb_005529_050 Hb_005529_050 Hb_000846_020--Hb_005529_050 Hb_004096_040 Hb_004096_040 Hb_000846_020--Hb_004096_040 Hb_028487_080 Hb_028487_080 Hb_000846_020--Hb_028487_080 Hb_001821_070--Hb_015473_020 Hb_001821_070--Hb_028487_080 Hb_001821_070--Hb_005529_050 Hb_001821_070--Hb_000876_060 Hb_000501_180 Hb_000501_180 Hb_001821_070--Hb_000501_180 Hb_000876_060--Hb_004096_040 Hb_002864_040 Hb_002864_040 Hb_000876_060--Hb_002864_040 Hb_000876_060--Hb_005529_050 Hb_000876_060--Hb_015473_020 Hb_015473_020--Hb_028487_080 Hb_015473_020--Hb_005529_050 Hb_000522_020 Hb_000522_020 Hb_015473_020--Hb_000522_020 Hb_015473_020--Hb_000501_180 Hb_027556_080 Hb_027556_080 Hb_005529_050--Hb_027556_080 Hb_005529_050--Hb_028487_080 Hb_005529_050--Hb_004096_040 Hb_000395_160 Hb_000395_160 Hb_004096_040--Hb_000395_160 Hb_186671_020 Hb_186671_020 Hb_004096_040--Hb_186671_020 Hb_163950_060 Hb_163950_060 Hb_004096_040--Hb_163950_060 Hb_005687_020 Hb_005687_020 Hb_004096_040--Hb_005687_020 Hb_000979_270 Hb_000979_270 Hb_004096_040--Hb_000979_270 Hb_001031_020 Hb_001031_020 Hb_028487_080--Hb_001031_020 Hb_000635_170 Hb_000635_170 Hb_028487_080--Hb_000635_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.67055 0 0.0105505 0.0124675 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.149876

CAGE analysis