Hb_000849_070

Information

Type -
Description -
Location Contig849: 76783-78322
Sequence    

Annotation

kegg
ID rcu:RCOM_1626990
description hypothetical protein
nr
ID XP_012084857.1
description PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDG7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60288: 76688-78008 , PASA_asmbl_60289: 78036-78223
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000849_070 0.0 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
2 Hb_000069_160 0.0826382998 - - -
3 Hb_002217_310 0.082794454 - - PREDICTED: ER membrane protein complex subunit 6 [Jatropha curcas]
4 Hb_050455_010 0.0939762858 - - PREDICTED: prosaposin isoform X2 [Jatropha curcas]
5 Hb_001124_210 0.0951540847 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003847_080 0.0954277328 - - PREDICTED: uncharacterized protein LOC105647792 isoform X3 [Jatropha curcas]
7 Hb_002400_070 0.0984583089 transcription factor TF Family: AUX/IAA PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Jatropha curcas]
8 Hb_018790_030 0.1011858768 - - PREDICTED: cyclic phosphodiesterase-like [Jatropha curcas]
9 Hb_012305_050 0.1012493508 - - unnamed protein product [Coffea canephora]
10 Hb_003656_130 0.104347841 - - PREDICTED: protein bem46 isoform X2 [Jatropha curcas]
11 Hb_123475_010 0.1107837113 - - PREDICTED: hepatocyte growth factor-regulated tyrosine kinase substrate [Jatropha curcas]
12 Hb_185830_020 0.1112356214 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_150204_010 0.1140566738 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
14 Hb_033642_110 0.1189064967 - - PREDICTED: MLO-like protein 4 [Jatropha curcas]
15 Hb_141131_010 0.1190721297 - - Diphthamide biosynthesis protein, putative [Ricinus communis]
16 Hb_153054_010 0.1200868063 - - PREDICTED: metal tolerance protein 11-like [Populus euphratica]
17 Hb_000183_040 0.1207564137 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
18 Hb_021409_020 0.1224955856 - - PREDICTED: protein yippee-like At4g27745 [Malus domestica]
19 Hb_000802_080 0.1225618771 - - PREDICTED: F-box protein At5g46170-like [Jatropha curcas]
20 Hb_000245_130 0.1259155317 - - PREDICTED: nuclear pore complex protein NUP35 [Jatropha curcas]

Gene co-expression network

sample Hb_000849_070 Hb_000849_070 Hb_000069_160 Hb_000069_160 Hb_000849_070--Hb_000069_160 Hb_002217_310 Hb_002217_310 Hb_000849_070--Hb_002217_310 Hb_050455_010 Hb_050455_010 Hb_000849_070--Hb_050455_010 Hb_001124_210 Hb_001124_210 Hb_000849_070--Hb_001124_210 Hb_003847_080 Hb_003847_080 Hb_000849_070--Hb_003847_080 Hb_002400_070 Hb_002400_070 Hb_000849_070--Hb_002400_070 Hb_000069_160--Hb_050455_010 Hb_000069_160--Hb_002217_310 Hb_002982_040 Hb_002982_040 Hb_000069_160--Hb_002982_040 Hb_000069_160--Hb_003847_080 Hb_003502_080 Hb_003502_080 Hb_000069_160--Hb_003502_080 Hb_141131_010 Hb_141131_010 Hb_002217_310--Hb_141131_010 Hb_002217_310--Hb_001124_210 Hb_021409_020 Hb_021409_020 Hb_002217_310--Hb_021409_020 Hb_002217_310--Hb_003847_080 Hb_050455_010--Hb_002982_040 Hb_050455_010--Hb_003847_080 Hb_185830_020 Hb_185830_020 Hb_050455_010--Hb_185830_020 Hb_012305_050 Hb_012305_050 Hb_050455_010--Hb_012305_050 Hb_001124_210--Hb_003847_080 Hb_001124_210--Hb_141131_010 Hb_002078_150 Hb_002078_150 Hb_001124_210--Hb_002078_150 Hb_158092_070 Hb_158092_070 Hb_001124_210--Hb_158092_070 Hb_123475_010 Hb_123475_010 Hb_001124_210--Hb_123475_010 Hb_000363_500 Hb_000363_500 Hb_001124_210--Hb_000363_500 Hb_003847_080--Hb_012305_050 Hb_004128_190 Hb_004128_190 Hb_003847_080--Hb_004128_190 Hb_003847_080--Hb_185830_020 Hb_003847_080--Hb_002078_150 Hb_003847_080--Hb_000363_500 Hb_001655_070 Hb_001655_070 Hb_002400_070--Hb_001655_070 Hb_000703_090 Hb_000703_090 Hb_002400_070--Hb_000703_090 Hb_003656_130 Hb_003656_130 Hb_002400_070--Hb_003656_130 Hb_002400_070--Hb_050455_010 Hb_002400_070--Hb_123475_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.8681 15.8636 3.64226 33.6468 46.8148 62.3661
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.2316 32.0729 24.4594 23.3311 5.48185

CAGE analysis