Hb_000853_290

Information

Type -
Description -
Location Contig853: 217080-217914
Sequence    

Annotation

kegg
ID rcu:RCOM_1348200
description hypothetical protein
nr
ID XP_012082846.1
description PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K8W4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13990 PE=4 SV=1
Gene Ontology
ID GO:0050896
description PREDICTED: uncharacterized protein LOC105642585

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000853_290 0.0 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
2 Hb_006745_020 0.1658412163 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
3 Hb_000853_300 0.1777410581 - - -
4 Hb_182807_020 0.1868848893 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
5 Hb_009189_030 0.1871995657 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
6 Hb_025194_030 0.1883457159 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
7 Hb_007044_010 0.1955109654 - - -
8 Hb_000205_070 0.1975834174 - - kinase, putative [Ricinus communis]
9 Hb_000001_160 0.198105034 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X2 [Jatropha curcas]
10 Hb_001951_120 0.2056036353 - - -
11 Hb_003337_070 0.2059147925 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
12 Hb_027255_010 0.2064624128 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
13 Hb_000206_130 0.206563239 - - unnamed protein product [Vitis vinifera]
14 Hb_002326_060 0.2073673794 - - PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Populus euphratica]
15 Hb_004846_180 0.2082082462 - - heat shock protein, putative [Ricinus communis]
16 Hb_000212_130 0.2157166921 - - conserved hypothetical protein [Ricinus communis]
17 Hb_012340_020 0.2211486288 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
18 Hb_184326_010 0.2213009838 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
19 Hb_000544_120 0.2214945665 - - PREDICTED: thymidylate kinase [Jatropha curcas]
20 Hb_001534_070 0.223048363 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]

Gene co-expression network

sample Hb_000853_290 Hb_000853_290 Hb_006745_020 Hb_006745_020 Hb_000853_290--Hb_006745_020 Hb_000853_300 Hb_000853_300 Hb_000853_290--Hb_000853_300 Hb_182807_020 Hb_182807_020 Hb_000853_290--Hb_182807_020 Hb_009189_030 Hb_009189_030 Hb_000853_290--Hb_009189_030 Hb_025194_030 Hb_025194_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010 Hb_003337_070 Hb_003337_070 Hb_006745_020--Hb_003337_070 Hb_000205_070 Hb_000205_070 Hb_006745_020--Hb_000205_070 Hb_184326_010 Hb_184326_010 Hb_006745_020--Hb_184326_010 Hb_003647_120 Hb_003647_120 Hb_006745_020--Hb_003647_120 Hb_000398_130 Hb_000398_130 Hb_006745_020--Hb_000398_130 Hb_004846_180 Hb_004846_180 Hb_000853_300--Hb_004846_180 Hb_000853_300--Hb_182807_020 Hb_000853_300--Hb_025194_030 Hb_001951_120 Hb_001951_120 Hb_000853_300--Hb_001951_120 Hb_004097_020 Hb_004097_020 Hb_000853_300--Hb_004097_020 Hb_182807_020--Hb_184326_010 Hb_182807_020--Hb_004846_180 Hb_000206_130 Hb_000206_130 Hb_182807_020--Hb_000206_130 Hb_182807_020--Hb_000205_070 Hb_182807_020--Hb_006745_020 Hb_003222_010 Hb_003222_010 Hb_009189_030--Hb_003222_010 Hb_027255_010 Hb_027255_010 Hb_009189_030--Hb_027255_010 Hb_009189_030--Hb_000205_070 Hb_004631_160 Hb_004631_160 Hb_009189_030--Hb_004631_160 Hb_009189_030--Hb_003337_070 Hb_007382_020 Hb_007382_020 Hb_025194_030--Hb_007382_020 Hb_025194_030--Hb_004846_180 Hb_008749_050 Hb_008749_050 Hb_025194_030--Hb_008749_050 Hb_025194_030--Hb_184326_010 Hb_000140_370 Hb_000140_370 Hb_025194_030--Hb_000140_370 Hb_011639_010 Hb_011639_010 Hb_007044_010--Hb_011639_010 Hb_008616_030 Hb_008616_030 Hb_007044_010--Hb_008616_030 Hb_002311_230 Hb_002311_230 Hb_007044_010--Hb_002311_230 Hb_007044_010--Hb_004631_160 Hb_001522_010 Hb_001522_010 Hb_007044_010--Hb_001522_010 Hb_031073_010 Hb_031073_010 Hb_007044_010--Hb_031073_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.6637 23.4963 6.30277 3.22006 97.0577 43.4457
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.19691 1.23025 2.55381 0.059147 2.96932

CAGE analysis