Hb_000853_350

Information

Type -
Description -
Location Contig853: 253334-262331
Sequence    

Annotation

kegg
ID rcu:RCOM_1348030
description hypothetical protein
nr
ID XP_012082852.1
description PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
swissprot
ID Q3UDW8
description Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus GN=Hgsnat PE=1 SV=2
trembl
ID A0A067K8W8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13995 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60499: 253534-255568 , PASA_asmbl_60500: 255616-258104 , PASA_asmbl_60502: 261638-263587 , PASA_asmbl_60506: 258122-260695
cDNA
(Sanger)
(ID:Location)		 004_F13r.ab1: 261641-262311

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000853_350 0.0 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
2 Hb_004577_020 0.0647330465 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
3 Hb_001579_320 0.0722707793 - - pyroglutamyl-peptidase I, putative [Ricinus communis]
4 Hb_000193_190 0.0745371856 - - PREDICTED: dnaJ homolog subfamily C member 16 [Jatropha curcas]
5 Hb_003952_070 0.0756066766 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_040262_010 0.0773966411 - - PREDICTED: aspartate carbamoyltransferase 1, chloroplastic [Jatropha curcas]
7 Hb_000205_100 0.0784826591 - - PREDICTED: exportin-4 [Jatropha curcas]
8 Hb_000907_110 0.0831244906 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
9 Hb_005276_210 0.0836501766 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Jatropha curcas]
10 Hb_000853_170 0.0840279576 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
11 Hb_066182_010 0.0858799336 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Jatropha curcas]
12 Hb_017491_030 0.086469191 - - PREDICTED: 40S ribosomal protein SA-like [Jatropha curcas]
13 Hb_001946_010 0.0868485981 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
14 Hb_000191_150 0.0874260444 - - PREDICTED: uncharacterized protein LOC105637951 [Jatropha curcas]
15 Hb_106371_010 0.0888909877 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
16 Hb_000796_210 0.089125959 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006827_020 0.0907157482 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000085_160 0.0919360953 - - hypothetical protein CICLE_v10009012mg [Citrus clementina]
19 Hb_000023_220 0.0922699486 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 18 isoform X1 [Jatropha curcas]
20 Hb_000220_220 0.0927996711 - - PREDICTED: uncharacterized protein LOC105636907 [Jatropha curcas]

Gene co-expression network

sample Hb_000853_350 Hb_000853_350 Hb_004577_020 Hb_004577_020 Hb_000853_350--Hb_004577_020 Hb_001579_320 Hb_001579_320 Hb_000853_350--Hb_001579_320 Hb_000193_190 Hb_000193_190 Hb_000853_350--Hb_000193_190 Hb_003952_070 Hb_003952_070 Hb_000853_350--Hb_003952_070 Hb_040262_010 Hb_040262_010 Hb_000853_350--Hb_040262_010 Hb_000205_100 Hb_000205_100 Hb_000853_350--Hb_000205_100 Hb_011671_430 Hb_011671_430 Hb_004577_020--Hb_011671_430 Hb_010417_080 Hb_010417_080 Hb_004577_020--Hb_010417_080 Hb_001936_020 Hb_001936_020 Hb_004577_020--Hb_001936_020 Hb_000853_170 Hb_000853_170 Hb_004577_020--Hb_000853_170 Hb_004577_020--Hb_003952_070 Hb_001946_010 Hb_001946_010 Hb_001579_320--Hb_001946_010 Hb_000526_050 Hb_000526_050 Hb_001579_320--Hb_000526_050 Hb_001579_320--Hb_003952_070 Hb_001579_320--Hb_000193_190 Hb_003025_110 Hb_003025_110 Hb_001579_320--Hb_003025_110 Hb_001579_320--Hb_040262_010 Hb_000193_190--Hb_000205_100 Hb_000011_200 Hb_000011_200 Hb_000193_190--Hb_000011_200 Hb_000193_190--Hb_001946_010 Hb_000225_040 Hb_000225_040 Hb_000193_190--Hb_000225_040 Hb_007576_110 Hb_007576_110 Hb_000193_190--Hb_007576_110 Hb_011930_160 Hb_011930_160 Hb_000193_190--Hb_011930_160 Hb_004881_020 Hb_004881_020 Hb_003952_070--Hb_004881_020 Hb_006252_040 Hb_006252_040 Hb_003952_070--Hb_006252_040 Hb_007594_130 Hb_007594_130 Hb_003952_070--Hb_007594_130 Hb_000538_100 Hb_000538_100 Hb_003952_070--Hb_000538_100 Hb_005276_210 Hb_005276_210 Hb_003952_070--Hb_005276_210 Hb_001489_150 Hb_001489_150 Hb_003952_070--Hb_001489_150 Hb_002671_100 Hb_002671_100 Hb_040262_010--Hb_002671_100 Hb_103012_010 Hb_103012_010 Hb_040262_010--Hb_103012_010 Hb_040262_010--Hb_001946_010 Hb_007317_110 Hb_007317_110 Hb_040262_010--Hb_007317_110 Hb_000260_170 Hb_000260_170 Hb_040262_010--Hb_000260_170 Hb_040262_010--Hb_007594_130 Hb_000205_100--Hb_001946_010 Hb_000205_100--Hb_000225_040 Hb_000613_050 Hb_000613_050 Hb_000205_100--Hb_000613_050 Hb_004689_050 Hb_004689_050 Hb_000205_100--Hb_004689_050 Hb_001178_070 Hb_001178_070 Hb_000205_100--Hb_001178_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.33243 9.09181 4.69235 8.0593 15.298 11.8205
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1363 11.0354 6.57268 11.3027 4.41941

CAGE analysis