Hb_000856_350

Information

Type transcription factor
Description TF Family: WRKY
Location Contig856: 313768-317353
Sequence    

Annotation

kegg
ID rcu:RCOM_1513950
description WRKY transcription factor, putative
nr
ID AGQ04225.1
description WRKY transcription factor 36 [Jatropha curcas]
swissprot
ID Q9LXG8
description Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1
trembl
ID S5CKG5
description Uncharacterized protein OS=Jatropha curcas GN=WRKY36 PE=4 SV=1
Gene Ontology
ID GO:0003677
description probable wrky transcription factor 72 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000856_350 0.0 transcription factor TF Family: WRKY WRKY transcription factor 36 [Jatropha curcas]
2 Hb_181092_010 0.0664811634 - - unnamed protein product [Vitis vinifera]
3 Hb_156949_010 0.0747672941 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
4 Hb_007729_010 0.0908189065 - - unnamed protein product [Vitis vinifera]
5 Hb_002986_110 0.0937424094 - - PREDICTED: patatin-like protein 1 [Jatropha curcas]
6 Hb_013654_010 0.0943229955 - - unnamed protein product [Vitis vinifera]
7 Hb_032582_010 0.0953288029 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
8 Hb_010839_020 0.095695007 - - -
9 Hb_002138_030 0.0957544395 - - -
10 Hb_151236_010 0.0959563111 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
11 Hb_004195_050 0.0969521308 - - -
12 Hb_007382_060 0.0969585462 - - -
13 Hb_000000_220 0.0975979131 - - protein with unknown function [Ricinus communis]
14 Hb_007658_020 0.0976627813 - - Beta-amyrin synthase [Glycine soja]
15 Hb_002677_010 0.0980091087 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2 [Populus euphratica]
16 Hb_005846_010 0.0984312877 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
17 Hb_003010_060 0.098710605 - - Patatin T5 precursor, putative [Ricinus communis]
18 Hb_125876_010 0.0990961672 - - unnamed protein product [Vitis vinifera]
19 Hb_002603_020 0.0991747845 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
20 Hb_001427_130 0.1011562248 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]

Gene co-expression network

sample Hb_000856_350 Hb_000856_350 Hb_181092_010 Hb_181092_010 Hb_000856_350--Hb_181092_010 Hb_156949_010 Hb_156949_010 Hb_000856_350--Hb_156949_010 Hb_007729_010 Hb_007729_010 Hb_000856_350--Hb_007729_010 Hb_002986_110 Hb_002986_110 Hb_000856_350--Hb_002986_110 Hb_013654_010 Hb_013654_010 Hb_000856_350--Hb_013654_010 Hb_032582_010 Hb_032582_010 Hb_000856_350--Hb_032582_010 Hb_181092_010--Hb_156949_010 Hb_002677_010 Hb_002677_010 Hb_181092_010--Hb_002677_010 Hb_181092_010--Hb_002986_110 Hb_000185_060 Hb_000185_060 Hb_181092_010--Hb_000185_060 Hb_181092_010--Hb_013654_010 Hb_002603_020 Hb_002603_020 Hb_156949_010--Hb_002603_020 Hb_125876_010 Hb_125876_010 Hb_156949_010--Hb_125876_010 Hb_005846_010 Hb_005846_010 Hb_156949_010--Hb_005846_010 Hb_004918_040 Hb_004918_040 Hb_156949_010--Hb_004918_040 Hb_003735_010 Hb_003735_010 Hb_156949_010--Hb_003735_010 Hb_007729_010--Hb_002677_010 Hb_007729_010--Hb_181092_010 Hb_007729_010--Hb_032582_010 Hb_001269_020 Hb_001269_020 Hb_007729_010--Hb_001269_020 Hb_006198_150 Hb_006198_150 Hb_007729_010--Hb_006198_150 Hb_002986_110--Hb_013654_010 Hb_002005_010 Hb_002005_010 Hb_002986_110--Hb_002005_010 Hb_008214_010 Hb_008214_010 Hb_002986_110--Hb_008214_010 Hb_008052_020 Hb_008052_020 Hb_002986_110--Hb_008052_020 Hb_032443_030 Hb_032443_030 Hb_002986_110--Hb_032443_030 Hb_032215_070 Hb_032215_070 Hb_002986_110--Hb_032215_070 Hb_013654_010--Hb_008214_010 Hb_013654_010--Hb_008052_020 Hb_013654_010--Hb_002005_010 Hb_013654_010--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_013654_010--Hb_001427_130 Hb_032582_010--Hb_002677_010 Hb_008616_020 Hb_008616_020 Hb_032582_010--Hb_008616_020 Hb_032582_010--Hb_002986_110 Hb_032582_010--Hb_013654_010 Hb_000905_030 Hb_000905_030 Hb_032582_010--Hb_000905_030 Hb_032582_010--Hb_000185_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.39428 0 0.0383588 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0233051 0 0 1.93379 0

CAGE analysis