Hb_000857_050

Information

Type -
Description -
Location Contig857: 78825-79562
Sequence    

Annotation

kegg
ID pop:POPTR_0011s16830g
description hypothetical protein
nr
ID XP_012078491.1
description PREDICTED: protein YLS9 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KK44
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13175 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60651: 78932-79272 , PASA_asmbl_60652: 79431-79798
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000857_050 0.0 - - PREDICTED: protein YLS9 [Jatropha curcas]
2 Hb_000832_200 0.1671362277 - - 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
3 Hb_000099_220 0.1826760662 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
4 Hb_000101_160 0.201257605 - - PREDICTED: uncharacterized protein LOC105133607 isoform X1 [Populus euphratica]
5 Hb_003768_040 0.2026953848 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_001329_260 0.2067162323 - - PREDICTED: uncharacterized protein LOC105642694 isoform X1 [Jatropha curcas]
7 Hb_000431_020 0.2087768665 - - hypothetical protein JCGZ_06801 [Jatropha curcas]
8 Hb_006483_010 0.2124675878 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_000163_280 0.2211413407 - - PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1 [Jatropha curcas]
10 Hb_050686_010 0.2224195618 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000040_050 0.2229790592 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
12 Hb_138600_010 0.2242732873 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
13 Hb_004650_080 0.2369234621 - - -
14 Hb_098315_110 0.2394024806 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000406_040 0.2406096432 - - PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like protein 5 [Jatropha curcas]
16 Hb_000176_170 0.2433375909 - - PREDICTED: tetratricopeptide repeat protein 1 [Jatropha curcas]
17 Hb_005725_020 0.244303962 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Jatropha curcas]
18 Hb_063716_010 0.2448349245 - - phopholipase d alpha, putative [Ricinus communis]
19 Hb_002687_040 0.246439538 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
20 Hb_004097_020 0.2478783566 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000857_050 Hb_000857_050 Hb_000832_200 Hb_000832_200 Hb_000857_050--Hb_000832_200 Hb_000099_220 Hb_000099_220 Hb_000857_050--Hb_000099_220 Hb_000101_160 Hb_000101_160 Hb_000857_050--Hb_000101_160 Hb_003768_040 Hb_003768_040 Hb_000857_050--Hb_003768_040 Hb_001329_260 Hb_001329_260 Hb_000857_050--Hb_001329_260 Hb_000431_020 Hb_000431_020 Hb_000857_050--Hb_000431_020 Hb_000406_040 Hb_000406_040 Hb_000832_200--Hb_000406_040 Hb_007441_070 Hb_007441_070 Hb_000832_200--Hb_007441_070 Hb_098315_110 Hb_098315_110 Hb_000832_200--Hb_098315_110 Hb_000329_390 Hb_000329_390 Hb_000832_200--Hb_000329_390 Hb_006029_010 Hb_006029_010 Hb_000832_200--Hb_006029_010 Hb_002997_100 Hb_002997_100 Hb_000832_200--Hb_002997_100 Hb_000099_220--Hb_003768_040 Hb_000590_030 Hb_000590_030 Hb_000099_220--Hb_000590_030 Hb_064885_020 Hb_064885_020 Hb_000099_220--Hb_064885_020 Hb_002450_110 Hb_002450_110 Hb_000099_220--Hb_002450_110 Hb_104812_030 Hb_104812_030 Hb_000099_220--Hb_104812_030 Hb_001678_020 Hb_001678_020 Hb_000101_160--Hb_001678_020 Hb_001506_010 Hb_001506_010 Hb_000101_160--Hb_001506_010 Hb_007603_010 Hb_007603_010 Hb_000101_160--Hb_007603_010 Hb_138600_010 Hb_138600_010 Hb_000101_160--Hb_138600_010 Hb_002233_090 Hb_002233_090 Hb_000101_160--Hb_002233_090 Hb_003768_040--Hb_098315_110 Hb_002311_250 Hb_002311_250 Hb_003768_040--Hb_002311_250 Hb_001946_360 Hb_001946_360 Hb_003768_040--Hb_001946_360 Hb_130177_010 Hb_130177_010 Hb_003768_040--Hb_130177_010 Hb_003768_040--Hb_000431_020 Hb_003320_030 Hb_003320_030 Hb_001329_260--Hb_003320_030 Hb_004650_080 Hb_004650_080 Hb_001329_260--Hb_004650_080 Hb_001196_050 Hb_001196_050 Hb_001329_260--Hb_001196_050 Hb_001329_260--Hb_098315_110 Hb_000331_610 Hb_000331_610 Hb_001329_260--Hb_000331_610 Hb_000176_170 Hb_000176_170 Hb_000431_020--Hb_000176_170 Hb_000431_020--Hb_000832_200 Hb_000038_030 Hb_000038_030 Hb_000431_020--Hb_000038_030 Hb_099864_010 Hb_099864_010 Hb_000431_020--Hb_099864_010 Hb_000431_020--Hb_000406_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.9995 3.93673 0.938084 8.30669 29.1952 10.3079
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.676994 0.413978 11.4626 3.19324 0.823899

CAGE analysis