Hb_000859_060

Information

Type -
Description -
Location Contig859: 82357-84883
Sequence    

Annotation

kegg
ID rcu:RCOM_1074990
description hypothetical protein
nr
ID XP_012081224.1
description PREDICTED: uncharacterized protein LOC105641312 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KEL4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17051 PE=4 SV=1
Gene Ontology
ID GO:0003712
description PREDICTED: uncharacterized protein LOC105641312

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60674: 82423-82872 , PASA_asmbl_60675: 83026-83377 , PASA_asmbl_60676: 84607-84708
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000859_060 0.0 - - PREDICTED: uncharacterized protein LOC105641312 [Jatropha curcas]
2 Hb_004785_060 0.0567135408 - - PREDICTED: SKP1-interacting partner 15 [Jatropha curcas]
3 Hb_000085_100 0.0653672941 - - PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Jatropha curcas]
4 Hb_009767_100 0.0695919206 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
5 Hb_000000_370 0.0715601905 transcription factor TF Family: BES1 PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Jatropha curcas]
6 Hb_001178_140 0.0717514331 - - PREDICTED: uncharacterized protein LOC105629472 isoform X1 [Jatropha curcas]
7 Hb_004355_020 0.0791507545 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]
8 Hb_000189_560 0.0839993503 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
9 Hb_011218_040 0.0841843467 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
10 Hb_000203_160 0.085148552 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2-like [Jatropha curcas]
11 Hb_001277_270 0.08526173 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
12 Hb_126643_020 0.0855093325 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
13 Hb_004837_040 0.0860483888 - - PREDICTED: nucleolar GTP-binding protein 1-like [Prunus mume]
14 Hb_012807_050 0.0899937999 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
15 Hb_001021_170 0.0908710661 - - PREDICTED: uncharacterized protein LOC105642474 [Jatropha curcas]
16 Hb_000629_010 0.0909110453 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 32 isoform X1 [Jatropha curcas]
17 Hb_001005_190 0.0911707333 - - PREDICTED: UPF0496 protein At3g19330-like isoform X1 [Jatropha curcas]
18 Hb_000567_210 0.0931288712 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2-like [Jatropha curcas]
19 Hb_002813_050 0.0946895887 desease resistance Gene Name: TIR_2 PREDICTED: uncharacterized protein LOC105635699 [Jatropha curcas]
20 Hb_004907_110 0.095802512 - - PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000859_060 Hb_000859_060 Hb_004785_060 Hb_004785_060 Hb_000859_060--Hb_004785_060 Hb_000085_100 Hb_000085_100 Hb_000859_060--Hb_000085_100 Hb_009767_100 Hb_009767_100 Hb_000859_060--Hb_009767_100 Hb_000000_370 Hb_000000_370 Hb_000859_060--Hb_000000_370 Hb_001178_140 Hb_001178_140 Hb_000859_060--Hb_001178_140 Hb_004355_020 Hb_004355_020 Hb_000859_060--Hb_004355_020 Hb_004785_060--Hb_000000_370 Hb_012807_050 Hb_012807_050 Hb_004785_060--Hb_012807_050 Hb_001021_170 Hb_001021_170 Hb_004785_060--Hb_001021_170 Hb_004785_060--Hb_004355_020 Hb_000181_070 Hb_000181_070 Hb_004785_060--Hb_000181_070 Hb_000085_100--Hb_001178_140 Hb_000085_100--Hb_000000_370 Hb_004204_170 Hb_004204_170 Hb_000085_100--Hb_004204_170 Hb_126643_020 Hb_126643_020 Hb_000085_100--Hb_126643_020 Hb_000629_010 Hb_000629_010 Hb_000085_100--Hb_000629_010 Hb_001005_190 Hb_001005_190 Hb_009767_100--Hb_001005_190 Hb_005288_010 Hb_005288_010 Hb_009767_100--Hb_005288_010 Hb_003055_060 Hb_003055_060 Hb_009767_100--Hb_003055_060 Hb_012055_060 Hb_012055_060 Hb_009767_100--Hb_012055_060 Hb_000189_560 Hb_000189_560 Hb_009767_100--Hb_000189_560 Hb_004837_040 Hb_004837_040 Hb_000000_370--Hb_004837_040 Hb_000062_250 Hb_000062_250 Hb_000000_370--Hb_000062_250 Hb_000000_370--Hb_012807_050 Hb_001178_140--Hb_000629_010 Hb_007813_040 Hb_007813_040 Hb_001178_140--Hb_007813_040 Hb_001892_020 Hb_001892_020 Hb_001178_140--Hb_001892_020 Hb_001178_140--Hb_004204_170 Hb_007254_070 Hb_007254_070 Hb_004355_020--Hb_007254_070 Hb_011671_430 Hb_011671_430 Hb_004355_020--Hb_011671_430 Hb_004355_020--Hb_001021_170 Hb_004355_020--Hb_000629_010 Hb_011218_040 Hb_011218_040 Hb_004355_020--Hb_011218_040 Hb_006788_020 Hb_006788_020 Hb_004355_020--Hb_006788_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.72798 7.16509 2.41233 2.58548 4.09574 5.04736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.96501 4.8854 6.95114 4.35863 1.47563

CAGE analysis