Hb_000861_100

Information

Type -
Description -
Location Contig861: 60232-72462
Sequence    

Annotation

kegg
ID rcu:RCOM_0621470
description Galactoside 2-alpha-L-fucosyltransferase, putative (EC:2.4.1.69)
nr
ID XP_012068737.1
description PREDICTED: probable fucosyltransferase 8 isoform X1 [Jatropha curcas]
swissprot
ID Q9M5Q1
description Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1
trembl
ID B9SHU0
description Galactoside 2-alpha-L-fucosyltransferase, putative OS=Ricinus communis GN=RCOM_0621470 PE=4 SV=1
Gene Ontology
ID GO:0016020
description galactoside 2-alpha-l-fucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60822: 63501-65881 , PASA_asmbl_60823: 66863-67455 , PASA_asmbl_60824: 67203-67391
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000861_100 0.0 - - PREDICTED: probable fucosyltransferase 8 isoform X1 [Jatropha curcas]
2 Hb_000057_130 0.0795967883 - - PREDICTED: pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Jatropha curcas]
3 Hb_007229_050 0.1067330882 - - PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Jatropha curcas]
4 Hb_003371_070 0.1129690257 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
5 Hb_007537_030 0.1200603218 - - PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic [Jatropha curcas]
6 Hb_005305_120 0.1200681426 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
7 Hb_004129_010 0.1202369113 - - aspartate aminotransferase, putative [Ricinus communis]
8 Hb_124315_010 0.1217833895 - - PREDICTED: uncharacterized protein LOC105650413 [Jatropha curcas]
9 Hb_004522_030 0.1248849379 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Jatropha curcas]
10 Hb_001754_050 0.126380468 - - protein arginine n-methyltransferase, putative [Ricinus communis]
11 Hb_000622_060 0.1266899 - - PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Jatropha curcas]
12 Hb_000157_140 0.1280919932 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
13 Hb_002200_070 0.1285042087 - - PREDICTED: endoglucanase 9-like [Populus euphratica]
14 Hb_000339_020 0.1328425117 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 12-like [Jatropha curcas]
15 Hb_000570_020 0.1362937347 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
16 Hb_000928_120 0.1388892677 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
17 Hb_000375_300 0.1393984606 - - PREDICTED: cyanate hydratase [Jatropha curcas]
18 Hb_006185_030 0.1395073905 - - threonine synthase, putative [Ricinus communis]
19 Hb_132840_160 0.1397380901 - - conserved hypothetical protein [Ricinus communis]
20 Hb_029584_100 0.1400829133 - - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [Gossypium arboreum]

Gene co-expression network

sample Hb_000861_100 Hb_000861_100 Hb_000057_130 Hb_000057_130 Hb_000861_100--Hb_000057_130 Hb_007229_050 Hb_007229_050 Hb_000861_100--Hb_007229_050 Hb_003371_070 Hb_003371_070 Hb_000861_100--Hb_003371_070 Hb_007537_030 Hb_007537_030 Hb_000861_100--Hb_007537_030 Hb_005305_120 Hb_005305_120 Hb_000861_100--Hb_005305_120 Hb_004129_010 Hb_004129_010 Hb_000861_100--Hb_004129_010 Hb_000057_130--Hb_003371_070 Hb_001754_050 Hb_001754_050 Hb_000057_130--Hb_001754_050 Hb_000057_130--Hb_004129_010 Hb_000339_020 Hb_000339_020 Hb_000057_130--Hb_000339_020 Hb_000922_320 Hb_000922_320 Hb_000057_130--Hb_000922_320 Hb_006185_030 Hb_006185_030 Hb_007229_050--Hb_006185_030 Hb_007229_050--Hb_004129_010 Hb_001235_130 Hb_001235_130 Hb_007229_050--Hb_001235_130 Hb_098533_010 Hb_098533_010 Hb_007229_050--Hb_098533_010 Hb_000157_140 Hb_000157_140 Hb_007229_050--Hb_000157_140 Hb_000256_160 Hb_000256_160 Hb_007229_050--Hb_000256_160 Hb_002007_320 Hb_002007_320 Hb_003371_070--Hb_002007_320 Hb_000110_060 Hb_000110_060 Hb_003371_070--Hb_000110_060 Hb_001619_060 Hb_001619_060 Hb_003371_070--Hb_001619_060 Hb_000023_310 Hb_000023_310 Hb_003371_070--Hb_000023_310 Hb_003371_070--Hb_007537_030 Hb_000570_020 Hb_000570_020 Hb_007537_030--Hb_000570_020 Hb_007537_030--Hb_000157_140 Hb_004030_060 Hb_004030_060 Hb_007537_030--Hb_004030_060 Hb_018845_010 Hb_018845_010 Hb_007537_030--Hb_018845_010 Hb_021576_070 Hb_021576_070 Hb_007537_030--Hb_021576_070 Hb_004326_010 Hb_004326_010 Hb_007537_030--Hb_004326_010 Hb_002835_280 Hb_002835_280 Hb_005305_120--Hb_002835_280 Hb_001124_140 Hb_001124_140 Hb_005305_120--Hb_001124_140 Hb_002759_100 Hb_002759_100 Hb_005305_120--Hb_002759_100 Hb_009449_100 Hb_009449_100 Hb_005305_120--Hb_009449_100 Hb_005731_100 Hb_005731_100 Hb_005305_120--Hb_005731_100 Hb_005588_120 Hb_005588_120 Hb_004129_010--Hb_005588_120 Hb_004129_010--Hb_001754_050 Hb_004129_010--Hb_000256_160 Hb_004129_010--Hb_000157_140 Hb_003030_010 Hb_003030_010 Hb_004129_010--Hb_003030_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.451593 1.527 2.01481 3.54029 0.0842197 0.138774
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.8418 0.650456 0.533944 1.97992 2.57816

CAGE analysis