Hb_000862_020

Information

Type -
Description -
Location Contig862: 23856-25718
Sequence    

Annotation

kegg
ID rcu:RCOM_1684620
description cytochrome P450, putative (EC:1.14.13.77)
nr
ID XP_012086991.1
description PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
swissprot
ID Q7XU38
description Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3
trembl
ID A0A067JRP1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20654 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 87a3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000862_020 0.0 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
2 Hb_007194_020 0.0958187679 - - PREDICTED: uncharacterized protein LOC105641615 [Jatropha curcas]
3 Hb_150998_010 0.1237864642 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
4 Hb_006216_010 0.1258226387 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]
5 Hb_058148_010 0.139499243 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
6 Hb_046117_040 0.1678544903 - - hypothetical protein JCGZ_07941 [Jatropha curcas]
7 Hb_010810_090 0.184666404 - - -
8 Hb_001687_050 0.1866226819 - - -
9 Hb_002774_130 0.1966750021 - - -
10 Hb_000281_170 0.2099266884 - - polyprotein [Citrus endogenous pararetrovirus]
11 Hb_063472_010 0.2195365513 - - hypothetical protein [Pseudomonas tolaasii]
12 Hb_000117_170 0.2450714281 - - PREDICTED: uncharacterized protein LOC104088736 isoform X2 [Nicotiana tomentosiformis]
13 Hb_020581_030 0.2451477342 - - -
14 Hb_126907_010 0.246934004 - - -
15 Hb_007163_140 0.2651131437 transcription factor TF Family: bHLH hypothetical protein JCGZ_12606 [Jatropha curcas]
16 Hb_045527_010 0.2662890243 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
17 Hb_172632_020 0.2734213324 - - -
18 Hb_000849_110 0.2836321373 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
19 Hb_003185_060 0.2861626067 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Amborella trichopoda]
20 Hb_084611_010 0.2923945028 - - PREDICTED: uncharacterized protein LOC104249812 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000862_020 Hb_000862_020 Hb_007194_020 Hb_007194_020 Hb_000862_020--Hb_007194_020 Hb_150998_010 Hb_150998_010 Hb_000862_020--Hb_150998_010 Hb_006216_010 Hb_006216_010 Hb_000862_020--Hb_006216_010 Hb_058148_010 Hb_058148_010 Hb_000862_020--Hb_058148_010 Hb_046117_040 Hb_046117_040 Hb_000862_020--Hb_046117_040 Hb_010810_090 Hb_010810_090 Hb_000862_020--Hb_010810_090 Hb_007194_020--Hb_058148_010 Hb_063472_010 Hb_063472_010 Hb_007194_020--Hb_063472_010 Hb_007194_020--Hb_006216_010 Hb_007194_020--Hb_150998_010 Hb_007194_020--Hb_010810_090 Hb_150998_010--Hb_006216_010 Hb_150998_010--Hb_046117_040 Hb_126907_010 Hb_126907_010 Hb_150998_010--Hb_126907_010 Hb_000281_170 Hb_000281_170 Hb_150998_010--Hb_000281_170 Hb_006216_010--Hb_046117_040 Hb_006216_010--Hb_126907_010 Hb_006216_010--Hb_058148_010 Hb_058148_010--Hb_063472_010 Hb_045527_010 Hb_045527_010 Hb_058148_010--Hb_045527_010 Hb_058148_010--Hb_010810_090 Hb_046117_040--Hb_000281_170 Hb_002774_130 Hb_002774_130 Hb_046117_040--Hb_002774_130 Hb_000117_170 Hb_000117_170 Hb_046117_040--Hb_000117_170 Hb_046117_040--Hb_126907_010 Hb_000849_110 Hb_000849_110 Hb_046117_040--Hb_000849_110 Hb_010810_090--Hb_063472_010 Hb_010810_090--Hb_045527_010 Hb_001410_100 Hb_001410_100 Hb_010810_090--Hb_001410_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0320031 0 0 0 0.0205378
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0277595 0

CAGE analysis