Hb_000866_100

Information

Type -
Description -
Location Contig866: 90609-96753
Sequence    

Annotation

kegg
ID pop:POPTR_0002s16140g
description POPTRDRAFT_552174; hypothetical protein
nr
ID XP_012083385.1
description PREDICTED: protein PAIR1 isoform X2 [Jatropha curcas]
swissprot
ID Q75RY2
description Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=1 SV=1
trembl
ID A0A067JXJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14393 PE=4 SV=1
Gene Ontology
ID GO:0007127
description recombination initiation defects isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_100 0.0 - - PREDICTED: protein PAIR1 isoform X2 [Jatropha curcas]
2 Hb_003740_030 0.1129535884 transcription factor TF Family: RAV DNA-binding protein RAV1, putative [Ricinus communis]
3 Hb_000284_280 0.1460033456 - - -
4 Hb_034498_010 0.1560111661 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
5 Hb_001390_040 0.1607940188 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
6 Hb_022845_010 0.164190919 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
7 Hb_001322_220 0.1674026469 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
8 Hb_000527_020 0.1684619245 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
9 Hb_001190_030 0.1700849645 - - hypothetical protein VITISV_017115 [Vitis vinifera]
10 Hb_000162_160 0.1720835238 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
11 Hb_004619_090 0.1783296515 - - conserved hypothetical protein [Ricinus communis]
12 Hb_118282_020 0.1793391175 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
13 Hb_000700_020 0.1799269671 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
14 Hb_000654_060 0.1819734992 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
15 Hb_120289_010 0.1848600014 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
16 Hb_000056_290 0.1854452167 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000138_120 0.1854999885 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000890_140 0.1855238885 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
19 Hb_125781_010 0.1884663248 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
20 Hb_006573_310 0.1901741906 - - Tellurite resistance protein tehA, putative [Ricinus communis]

Gene co-expression network

sample Hb_000866_100 Hb_000866_100 Hb_003740_030 Hb_003740_030 Hb_000866_100--Hb_003740_030 Hb_000284_280 Hb_000284_280 Hb_000866_100--Hb_000284_280 Hb_034498_010 Hb_034498_010 Hb_000866_100--Hb_034498_010 Hb_001390_040 Hb_001390_040 Hb_000866_100--Hb_001390_040 Hb_022845_010 Hb_022845_010 Hb_000866_100--Hb_022845_010 Hb_001322_220 Hb_001322_220 Hb_000866_100--Hb_001322_220 Hb_007382_090 Hb_007382_090 Hb_003740_030--Hb_007382_090 Hb_003740_030--Hb_001390_040 Hb_007474_020 Hb_007474_020 Hb_003740_030--Hb_007474_020 Hb_003740_030--Hb_034498_010 Hb_000034_150 Hb_000034_150 Hb_003740_030--Hb_000034_150 Hb_001946_090 Hb_001946_090 Hb_000284_280--Hb_001946_090 Hb_005065_090 Hb_005065_090 Hb_000284_280--Hb_005065_090 Hb_000760_090 Hb_000760_090 Hb_000284_280--Hb_000760_090 Hb_010543_010 Hb_010543_010 Hb_000284_280--Hb_010543_010 Hb_001488_170 Hb_001488_170 Hb_000284_280--Hb_001488_170 Hb_000890_140 Hb_000890_140 Hb_034498_010--Hb_000890_140 Hb_034498_010--Hb_022845_010 Hb_005141_020 Hb_005141_020 Hb_034498_010--Hb_005141_020 Hb_000527_020 Hb_000527_020 Hb_034498_010--Hb_000527_020 Hb_001190_030 Hb_001190_030 Hb_034498_010--Hb_001190_030 Hb_034498_010--Hb_001322_220 Hb_001307_150 Hb_001307_150 Hb_001390_040--Hb_001307_150 Hb_001390_040--Hb_000527_020 Hb_001390_040--Hb_000890_140 Hb_000856_390 Hb_000856_390 Hb_001390_040--Hb_000856_390 Hb_003847_060 Hb_003847_060 Hb_001390_040--Hb_003847_060 Hb_001390_040--Hb_007474_020 Hb_022845_010--Hb_001322_220 Hb_022845_010--Hb_001190_030 Hb_000654_060 Hb_000654_060 Hb_022845_010--Hb_000654_060 Hb_120289_010 Hb_120289_010 Hb_022845_010--Hb_120289_010 Hb_152528_010 Hb_152528_010 Hb_022845_010--Hb_152528_010 Hb_000162_160 Hb_000162_160 Hb_022845_010--Hb_000162_160 Hb_001322_220--Hb_001190_030 Hb_000185_190 Hb_000185_190 Hb_001322_220--Hb_000185_190 Hb_015754_010 Hb_015754_010 Hb_001322_220--Hb_015754_010 Hb_001031_130 Hb_001031_130 Hb_001322_220--Hb_001031_130 Hb_002081_110 Hb_002081_110 Hb_001322_220--Hb_002081_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0335063 0.871347 0.531785 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0657936 0 0.0131844 0

CAGE analysis