Hb_000866_130

Information

Type -
Description -
Location Contig866: 128295-128522
Sequence    

Annotation

kegg
ID pop:POPTR_0002s16110g
description hypothetical protein
nr
ID KDP28626.1
description hypothetical protein JCGZ_14397 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14397 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_130 0.0 - - hypothetical protein JCGZ_14397 [Jatropha curcas]
2 Hb_003466_010 0.074019109 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
3 Hb_001818_010 0.0746255627 - - Disease resistance response protein, putative [Ricinus communis]
4 Hb_006153_140 0.0790134782 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
5 Hb_004032_290 0.0820041997 - - protein binding protein, putative [Ricinus communis]
6 Hb_000083_200 0.08567795 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004020_030 0.0887701597 - - Magnesium and cobalt efflux protein corC, putative [Ricinus communis]
8 Hb_009079_020 0.08960693 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
9 Hb_001898_040 0.0914333819 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
10 Hb_001136_040 0.0921275748 - - amino acid transporter, putative [Ricinus communis]
11 Hb_002260_140 0.0941281985 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002874_200 0.09415695 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
13 Hb_010142_060 0.0946640155 - - Blue copper protein precursor, putative [Ricinus communis]
14 Hb_000093_010 0.0949122922 - - Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
15 Hb_007122_020 0.0955519984 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
16 Hb_015175_070 0.0955900424 - - cysteine protease, putative [Ricinus communis]
17 Hb_000230_410 0.0957713319 - - PREDICTED: uncharacterized protein LOC105631891 [Jatropha curcas]
18 Hb_000408_060 0.0957728594 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
19 Hb_001349_040 0.0971159561 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
20 Hb_000395_310 0.0979063534 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000866_130 Hb_000866_130 Hb_003466_010 Hb_003466_010 Hb_000866_130--Hb_003466_010 Hb_001818_010 Hb_001818_010 Hb_000866_130--Hb_001818_010 Hb_006153_140 Hb_006153_140 Hb_000866_130--Hb_006153_140 Hb_004032_290 Hb_004032_290 Hb_000866_130--Hb_004032_290 Hb_000083_200 Hb_000083_200 Hb_000866_130--Hb_000083_200 Hb_004020_030 Hb_004020_030 Hb_000866_130--Hb_004020_030 Hb_005648_020 Hb_005648_020 Hb_003466_010--Hb_005648_020 Hb_000093_010 Hb_000093_010 Hb_003466_010--Hb_000093_010 Hb_036520_030 Hb_036520_030 Hb_003466_010--Hb_036520_030 Hb_012132_050 Hb_012132_050 Hb_003466_010--Hb_012132_050 Hb_008021_050 Hb_008021_050 Hb_003466_010--Hb_008021_050 Hb_002260_140 Hb_002260_140 Hb_001818_010--Hb_002260_140 Hb_051212_020 Hb_051212_020 Hb_001818_010--Hb_051212_020 Hb_009079_020 Hb_009079_020 Hb_001818_010--Hb_009079_020 Hb_112950_010 Hb_112950_010 Hb_001818_010--Hb_112950_010 Hb_135757_030 Hb_135757_030 Hb_001818_010--Hb_135757_030 Hb_006153_140--Hb_009079_020 Hb_002686_220 Hb_002686_220 Hb_006153_140--Hb_002686_220 Hb_006153_140--Hb_001818_010 Hb_006153_140--Hb_112950_010 Hb_015175_070 Hb_015175_070 Hb_006153_140--Hb_015175_070 Hb_002874_200 Hb_002874_200 Hb_004032_290--Hb_002874_200 Hb_004032_290--Hb_036520_030 Hb_007185_050 Hb_007185_050 Hb_004032_290--Hb_007185_050 Hb_000676_230 Hb_000676_230 Hb_004032_290--Hb_000676_230 Hb_000395_310 Hb_000395_310 Hb_004032_290--Hb_000395_310 Hb_000230_410 Hb_000230_410 Hb_004032_290--Hb_000230_410 Hb_001349_040 Hb_001349_040 Hb_000083_200--Hb_001349_040 Hb_000083_200--Hb_112950_010 Hb_009421_060 Hb_009421_060 Hb_000083_200--Hb_009421_060 Hb_000497_030 Hb_000497_030 Hb_000083_200--Hb_000497_030 Hb_006717_060 Hb_006717_060 Hb_000083_200--Hb_006717_060 Hb_000699_220 Hb_000699_220 Hb_000083_200--Hb_000699_220 Hb_002997_150 Hb_002997_150 Hb_004020_030--Hb_002997_150 Hb_004020_030--Hb_004032_290 Hb_001104_060 Hb_001104_060 Hb_004020_030--Hb_001104_060 Hb_002388_070 Hb_002388_070 Hb_004020_030--Hb_002388_070 Hb_004020_030--Hb_007185_050 Hb_004020_030--Hb_000230_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.62535 11.7721 48.9959 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.28737 12.9162

CAGE analysis