Hb_000866_360

Information

Type -
Description -
Location Contig866: 244107-245366
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_360 0.0 - - -
2 Hb_005743_090 0.1417647227 - - -
3 Hb_109358_010 0.2636339867 - - -
4 Hb_000111_410 0.2840113429 - - conserved hypothetical protein [Ricinus communis]
5 Hb_167364_020 0.3018807184 - - -
6 Hb_000189_060 0.3253019305 - - PREDICTED: uncharacterized protein LOC105637477 [Jatropha curcas]
7 Hb_023226_050 0.3253458955 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
8 Hb_005725_200 0.3376494954 transcription factor TF Family: GRF hypothetical protein JCGZ_15989 [Jatropha curcas]
9 Hb_004522_020 0.3437982703 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
10 Hb_004241_220 0.345354452 - - -
11 Hb_000513_080 0.3484995737 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
12 Hb_000680_040 0.3507848175 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
13 Hb_094730_010 0.3518462964 - - hypothetical protein JCGZ_04374 [Jatropha curcas]
14 Hb_153258_060 0.3523913511 - - -
15 Hb_000661_210 0.3651819602 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000653_020 0.3667065461 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
17 Hb_000003_140 0.3670189466 - - hypothetical protein glysoja_047034, partial [Glycine soja]
18 Hb_045481_010 0.3726640898 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
19 Hb_001049_080 0.3760385582 - - -
20 Hb_006671_020 0.3760992688 - - hypothetical protein CISIN_1g0407181mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_000866_360 Hb_000866_360 Hb_005743_090 Hb_005743_090 Hb_000866_360--Hb_005743_090 Hb_109358_010 Hb_109358_010 Hb_000866_360--Hb_109358_010 Hb_000111_410 Hb_000111_410 Hb_000866_360--Hb_000111_410 Hb_167364_020 Hb_167364_020 Hb_000866_360--Hb_167364_020 Hb_000189_060 Hb_000189_060 Hb_000866_360--Hb_000189_060 Hb_023226_050 Hb_023226_050 Hb_000866_360--Hb_023226_050 Hb_005743_090--Hb_167364_020 Hb_005743_090--Hb_000189_060 Hb_005743_090--Hb_109358_010 Hb_005743_090--Hb_000111_410 Hb_000513_080 Hb_000513_080 Hb_005743_090--Hb_000513_080 Hb_000680_040 Hb_000680_040 Hb_109358_010--Hb_000680_040 Hb_004241_220 Hb_004241_220 Hb_109358_010--Hb_004241_220 Hb_094730_010 Hb_094730_010 Hb_109358_010--Hb_094730_010 Hb_001433_060 Hb_001433_060 Hb_109358_010--Hb_001433_060 Hb_001184_120 Hb_001184_120 Hb_109358_010--Hb_001184_120 Hb_044662_050 Hb_044662_050 Hb_000111_410--Hb_044662_050 Hb_002641_040 Hb_002641_040 Hb_000111_410--Hb_002641_040 Hb_000653_020 Hb_000653_020 Hb_000111_410--Hb_000653_020 Hb_036790_030 Hb_036790_030 Hb_000111_410--Hb_036790_030 Hb_167364_020--Hb_000513_080 Hb_004522_020 Hb_004522_020 Hb_167364_020--Hb_004522_020 Hb_167364_020--Hb_000189_060 Hb_000516_070 Hb_000516_070 Hb_167364_020--Hb_000516_070 Hb_000189_060--Hb_000513_080 Hb_004640_040 Hb_004640_040 Hb_000189_060--Hb_004640_040 Hb_134312_010 Hb_134312_010 Hb_000189_060--Hb_134312_010 Hb_087008_010 Hb_087008_010 Hb_000189_060--Hb_087008_010 Hb_071379_010 Hb_071379_010 Hb_000189_060--Hb_071379_010 Hb_000392_200 Hb_000392_200 Hb_023226_050--Hb_000392_200 Hb_001049_080 Hb_001049_080 Hb_023226_050--Hb_001049_080 Hb_000375_270 Hb_000375_270 Hb_023226_050--Hb_000375_270 Hb_000006_020 Hb_000006_020 Hb_023226_050--Hb_000006_020 Hb_000015_240 Hb_000015_240 Hb_023226_050--Hb_000015_240 Hb_000016_090 Hb_000016_090 Hb_023226_050--Hb_000016_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.47263 0 2.67521 0 0.645053 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.29483 0 0.136844 0

CAGE analysis