Hb_000866_390

Information

Type -
Description -
Location Contig866: 255287-272419
Sequence    

Annotation

kegg
ID rcu:RCOM_1614990
description KDEL motif-containing protein 1 precursor, putative
nr
ID XP_012083424.1
description PREDICTED: O-glucosyltransferase rumi homolog [Jatropha curcas]
swissprot
ID B0X1Q4
description O-glucosyltransferase rumi homolog OS=Culex quinquefasciatus GN=CPIJ013394 PE=3 SV=1
trembl
ID A0A067K8Q5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14421 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60980: 271700-272087
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_390 0.0 - - PREDICTED: O-glucosyltransferase rumi homolog [Jatropha curcas]
2 Hb_004713_050 0.1197780527 - - RecName: Full=Beta-amyrin synthase [Betula platyphylla]
3 Hb_003649_030 0.1348040179 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
4 Hb_085010_010 0.1412532895 - - PREDICTED: MLO-like protein 3 isoform X2 [Vitis vinifera]
5 Hb_000059_080 0.1426744561 - - PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]
6 Hb_001971_020 0.1429476661 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
7 Hb_001411_100 0.1449199656 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
8 Hb_001008_020 0.1480680146 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_005306_020 0.1491440431 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
10 Hb_000417_150 0.1570116245 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
11 Hb_000603_120 0.1574393543 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
12 Hb_008111_010 0.1629625547 - - hypothetical protein VITISV_021527 [Vitis vinifera]
13 Hb_056506_010 0.1643698806 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
14 Hb_028872_100 0.1669894167 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
15 Hb_026053_030 0.1673351431 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
16 Hb_007320_020 0.1690170468 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
17 Hb_003212_010 0.17264949 - - sucrose transporter 4 [Hevea brasiliensis]
18 Hb_008195_020 0.1740964886 - - Vacuolar-processing enzyme precursor [Ricinus communis]
19 Hb_022108_010 0.1760767231 - - G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Glycine soja]
20 Hb_001357_360 0.1764330906 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000866_390 Hb_000866_390 Hb_004713_050 Hb_004713_050 Hb_000866_390--Hb_004713_050 Hb_003649_030 Hb_003649_030 Hb_000866_390--Hb_003649_030 Hb_085010_010 Hb_085010_010 Hb_000866_390--Hb_085010_010 Hb_000059_080 Hb_000059_080 Hb_000866_390--Hb_000059_080 Hb_001971_020 Hb_001971_020 Hb_000866_390--Hb_001971_020 Hb_001411_100 Hb_001411_100 Hb_000866_390--Hb_001411_100 Hb_002997_050 Hb_002997_050 Hb_004713_050--Hb_002997_050 Hb_064482_010 Hb_064482_010 Hb_004713_050--Hb_064482_010 Hb_004713_050--Hb_000059_080 Hb_022108_010 Hb_022108_010 Hb_004713_050--Hb_022108_010 Hb_007320_020 Hb_007320_020 Hb_004713_050--Hb_007320_020 Hb_000061_110 Hb_000061_110 Hb_003649_030--Hb_000061_110 Hb_056506_010 Hb_056506_010 Hb_003649_030--Hb_056506_010 Hb_009898_060 Hb_009898_060 Hb_003649_030--Hb_009898_060 Hb_001008_020 Hb_001008_020 Hb_003649_030--Hb_001008_020 Hb_003649_030--Hb_001411_100 Hb_011470_010 Hb_011470_010 Hb_085010_010--Hb_011470_010 Hb_008111_010 Hb_008111_010 Hb_085010_010--Hb_008111_010 Hb_126466_010 Hb_126466_010 Hb_085010_010--Hb_126466_010 Hb_002272_070 Hb_002272_070 Hb_085010_010--Hb_002272_070 Hb_085010_010--Hb_001971_020 Hb_005306_020 Hb_005306_020 Hb_085010_010--Hb_005306_020 Hb_003212_010 Hb_003212_010 Hb_000059_080--Hb_003212_010 Hb_000059_080--Hb_007320_020 Hb_003767_010 Hb_003767_010 Hb_000059_080--Hb_003767_010 Hb_000264_340 Hb_000264_340 Hb_000059_080--Hb_000264_340 Hb_005470_040 Hb_005470_040 Hb_000059_080--Hb_005470_040 Hb_109489_010 Hb_109489_010 Hb_000059_080--Hb_109489_010 Hb_001357_360 Hb_001357_360 Hb_001971_020--Hb_001357_360 Hb_000563_120 Hb_000563_120 Hb_001971_020--Hb_000563_120 Hb_001971_020--Hb_008111_010 Hb_001971_020--Hb_005306_020 Hb_001971_020--Hb_000264_340 Hb_001971_020--Hb_007320_020 Hb_000685_140 Hb_000685_140 Hb_001411_100--Hb_000685_140 Hb_000600_080 Hb_000600_080 Hb_001411_100--Hb_000600_080 Hb_000101_320 Hb_000101_320 Hb_001411_100--Hb_000101_320 Hb_028872_100 Hb_028872_100 Hb_001411_100--Hb_028872_100 Hb_001452_090 Hb_001452_090 Hb_001411_100--Hb_001452_090 Hb_000417_150 Hb_000417_150 Hb_001411_100--Hb_000417_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.41894 0.0328088 0.484991 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0290987 0.00763339 0 0.873384 1.24489

CAGE analysis