Hb_000866_480

Information

Type -
Description -
Location Contig866: 333074-334188
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_480 0.0 - - -
2 Hb_022693_100 0.0008761762 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
3 Hb_006810_080 0.0058311627 - - hypothetical protein EUGRSUZ_C015472, partial [Eucalyptus grandis]
4 Hb_176138_010 0.0060704511 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
5 Hb_009230_030 0.0086697073 - - -
6 Hb_000526_130 0.0159845228 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
7 Hb_003724_030 0.0179197811 - - -
8 Hb_006124_010 0.018323087 - - -
9 Hb_001504_290 0.0193883297 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
10 Hb_161981_020 0.0250364872 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000107_460 0.0262414513 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
12 Hb_021931_030 0.0301993036 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
13 Hb_008159_030 0.0388523671 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
14 Hb_110822_020 0.0427522422 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
15 Hb_002081_250 0.0433089931 - - hypothetical protein POPTR_0009s08940g [Populus trichocarpa]
16 Hb_170761_010 0.0434087102 - - PREDICTED: uncharacterized protein LOC105787794 [Gossypium raimondii]
17 Hb_000286_250 0.0439952126 desease resistance Gene Name: NB-ARC -
18 Hb_002200_010 0.0457024944 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
19 Hb_000057_030 0.0461862328 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_072368_010 0.0485060272 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]

Gene co-expression network

sample Hb_000866_480 Hb_000866_480 Hb_022693_100 Hb_022693_100 Hb_000866_480--Hb_022693_100 Hb_006810_080 Hb_006810_080 Hb_000866_480--Hb_006810_080 Hb_176138_010 Hb_176138_010 Hb_000866_480--Hb_176138_010 Hb_009230_030 Hb_009230_030 Hb_000866_480--Hb_009230_030 Hb_000526_130 Hb_000526_130 Hb_000866_480--Hb_000526_130 Hb_003724_030 Hb_003724_030 Hb_000866_480--Hb_003724_030 Hb_022693_100--Hb_006810_080 Hb_022693_100--Hb_176138_010 Hb_022693_100--Hb_009230_030 Hb_022693_100--Hb_000526_130 Hb_006124_010 Hb_006124_010 Hb_022693_100--Hb_006124_010 Hb_006810_080--Hb_176138_010 Hb_006810_080--Hb_006124_010 Hb_006810_080--Hb_009230_030 Hb_161981_020 Hb_161981_020 Hb_006810_080--Hb_161981_020 Hb_176138_010--Hb_006124_010 Hb_176138_010--Hb_009230_030 Hb_176138_010--Hb_161981_020 Hb_009230_030--Hb_000526_130 Hb_009230_030--Hb_003724_030 Hb_001504_290 Hb_001504_290 Hb_009230_030--Hb_001504_290 Hb_000526_130--Hb_003724_030 Hb_000526_130--Hb_001504_290 Hb_000107_460 Hb_000107_460 Hb_000526_130--Hb_000107_460 Hb_003724_030--Hb_001504_290 Hb_003724_030--Hb_000107_460 Hb_003724_030--Hb_022693_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.196682 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.564005 0

CAGE analysis