Hb_000869_080

Information

Type -
Description -
Location Contig869: 64818-67044
Sequence    

Annotation

kegg
ID rcu:RCOM_0970050
description hypothetical protein
nr
ID XP_012080947.1
description PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAU0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17080 PE=4 SV=1
Gene Ontology
ID GO:0016787
description ring-h2 zinc finger protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000869_080 0.0 - - PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
2 Hb_000729_030 0.0509662397 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
3 Hb_164010_040 0.056219695 - - serine/threonine protein kinase, putative [Ricinus communis]
4 Hb_013358_040 0.0618514725 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
5 Hb_000738_020 0.0659912331 - - zinc finger protein, putative [Ricinus communis]
6 Hb_005162_090 0.0671412613 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
7 Hb_002073_200 0.0674472846 - - Phosphatase 2A-2 [Theobroma cacao]
8 Hb_062226_130 0.0688297059 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
9 Hb_000522_150 0.0736002868 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]
10 Hb_000868_110 0.0737370895 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
11 Hb_002754_010 0.0742174041 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
12 Hb_000221_190 0.0749163942 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
13 Hb_095296_010 0.0767306244 - - PREDICTED: syntaxin-32 [Jatropha curcas]
14 Hb_003001_080 0.0809357857 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
15 Hb_004208_030 0.0812605748 transcription factor TF Family: MYB-related PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]
16 Hb_003849_110 0.0822538022 - - hypothetical protein JCGZ_17842 [Jatropha curcas]
17 Hb_005116_060 0.0832731425 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
18 Hb_001163_050 0.0838946208 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
19 Hb_000164_020 0.0840190735 - - actin binding protein, putative [Ricinus communis]
20 Hb_000261_020 0.0849300974 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000869_080 Hb_000869_080 Hb_000729_030 Hb_000729_030 Hb_000869_080--Hb_000729_030 Hb_164010_040 Hb_164010_040 Hb_000869_080--Hb_164010_040 Hb_013358_040 Hb_013358_040 Hb_000869_080--Hb_013358_040 Hb_000738_020 Hb_000738_020 Hb_000869_080--Hb_000738_020 Hb_005162_090 Hb_005162_090 Hb_000869_080--Hb_005162_090 Hb_002073_200 Hb_002073_200 Hb_000869_080--Hb_002073_200 Hb_000261_020 Hb_000261_020 Hb_000729_030--Hb_000261_020 Hb_000336_150 Hb_000336_150 Hb_000729_030--Hb_000336_150 Hb_000729_030--Hb_013358_040 Hb_003124_150 Hb_003124_150 Hb_000729_030--Hb_003124_150 Hb_010368_010 Hb_010368_010 Hb_000729_030--Hb_010368_010 Hb_002754_010 Hb_002754_010 Hb_164010_040--Hb_002754_010 Hb_062226_130 Hb_062226_130 Hb_164010_040--Hb_062226_130 Hb_164010_040--Hb_013358_040 Hb_001278_100 Hb_001278_100 Hb_164010_040--Hb_001278_100 Hb_164010_040--Hb_002073_200 Hb_000069_310 Hb_000069_310 Hb_013358_040--Hb_000069_310 Hb_000915_180 Hb_000915_180 Hb_013358_040--Hb_000915_180 Hb_013358_040--Hb_002073_200 Hb_003428_010 Hb_003428_010 Hb_013358_040--Hb_003428_010 Hb_000738_020--Hb_062226_130 Hb_012239_020 Hb_012239_020 Hb_000738_020--Hb_012239_020 Hb_000738_020--Hb_002073_200 Hb_000738_020--Hb_005162_090 Hb_003849_110 Hb_003849_110 Hb_000738_020--Hb_003849_110 Hb_005162_090--Hb_062226_130 Hb_139294_010 Hb_139294_010 Hb_005162_090--Hb_139294_010 Hb_012022_040 Hb_012022_040 Hb_005162_090--Hb_012022_040 Hb_000221_190 Hb_000221_190 Hb_005162_090--Hb_000221_190 Hb_000868_110 Hb_000868_110 Hb_002073_200--Hb_000868_110 Hb_000025_730 Hb_000025_730 Hb_002073_200--Hb_000025_730 Hb_095296_010 Hb_095296_010 Hb_002073_200--Hb_095296_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6854 15.8137 15.5654 13.9352 8.02834 12.0103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.231 19.383 13.5017 7.65005 11.3339

CAGE analysis