Hb_000876_040

Information

Type -
Description -
Location Contig876: 28803-36618
Sequence    

Annotation

kegg
ID tcc:TCM_037823
description Ankyrin repeat family protein isoform 1
nr
ID XP_012082600.1
description PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID A0A067JYY1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16565 PE=4 SV=1
Gene Ontology
ID GO:0005515
description ankyrin repeat-containing protein at3g12360-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000876_040 0.0 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
2 Hb_002513_050 0.1208288749 - - hypothetical protein F383_14794 [Gossypium arboreum]
3 Hb_168311_010 0.1670419793 - - -
4 Hb_125847_010 0.16917692 - - -
5 Hb_001143_260 0.1703713439 - - PREDICTED: metal transporter Nramp5-like [Populus euphratica]
6 Hb_000139_440 0.1714278227 - - unnamed protein product [Coffea canephora]
7 Hb_000430_010 0.1731334128 - - -
8 Hb_000590_020 0.1744897472 - - hypothetical protein JCGZ_18748 [Jatropha curcas]
9 Hb_047040_010 0.175983859 - - integrase [Gossypium herbaceum]
10 Hb_022206_060 0.1789129707 - - -
11 Hb_162126_010 0.1796035992 - - -
12 Hb_090826_010 0.1805874403 - - PREDICTED: uncharacterized protein LOC105786910 [Gossypium raimondii]
13 Hb_030928_010 0.1824942586 - - -
14 Hb_181535_010 0.1827834739 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_000351_030 0.183783663 - - putative NBS-LRR type disease resistance protein [Prunus persica]
16 Hb_139388_010 0.1839187668 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
17 Hb_001110_020 0.1841458804 - - hypothetical protein JCGZ_03693 [Jatropha curcas]
18 Hb_149358_010 0.1851234065 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_083493_050 0.1857344479 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
20 Hb_076908_010 0.1859675249 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_000876_040 Hb_000876_040 Hb_002513_050 Hb_002513_050 Hb_000876_040--Hb_002513_050 Hb_168311_010 Hb_168311_010 Hb_000876_040--Hb_168311_010 Hb_125847_010 Hb_125847_010 Hb_000876_040--Hb_125847_010 Hb_001143_260 Hb_001143_260 Hb_000876_040--Hb_001143_260 Hb_000139_440 Hb_000139_440 Hb_000876_040--Hb_000139_440 Hb_000430_010 Hb_000430_010 Hb_000876_040--Hb_000430_010 Hb_000184_200 Hb_000184_200 Hb_002513_050--Hb_000184_200 Hb_004785_010 Hb_004785_010 Hb_002513_050--Hb_004785_010 Hb_000174_190 Hb_000174_190 Hb_002513_050--Hb_000174_190 Hb_076908_010 Hb_076908_010 Hb_002513_050--Hb_076908_010 Hb_083493_050 Hb_083493_050 Hb_002513_050--Hb_083493_050 Hb_168311_010--Hb_000139_440 Hb_000590_020 Hb_000590_020 Hb_168311_010--Hb_000590_020 Hb_047040_010 Hb_047040_010 Hb_168311_010--Hb_047040_010 Hb_022206_060 Hb_022206_060 Hb_168311_010--Hb_022206_060 Hb_090826_010 Hb_090826_010 Hb_168311_010--Hb_090826_010 Hb_030928_010 Hb_030928_010 Hb_168311_010--Hb_030928_010 Hb_125847_010--Hb_000430_010 Hb_162126_010 Hb_162126_010 Hb_125847_010--Hb_162126_010 Hb_125847_010--Hb_168311_010 Hb_125847_010--Hb_000139_440 Hb_125847_010--Hb_000590_020 Hb_125847_010--Hb_047040_010 Hb_043623_020 Hb_043623_020 Hb_001143_260--Hb_043623_020 Hb_001143_260--Hb_002513_050 Hb_001221_280 Hb_001221_280 Hb_001143_260--Hb_001221_280 Hb_001143_260--Hb_000184_200 Hb_009615_080 Hb_009615_080 Hb_001143_260--Hb_009615_080 Hb_000139_440--Hb_000590_020 Hb_000139_440--Hb_047040_010 Hb_000139_440--Hb_022206_060 Hb_000139_440--Hb_090826_010 Hb_000139_440--Hb_030928_010 Hb_000430_010--Hb_162126_010 Hb_000430_010--Hb_168311_010 Hb_008246_050 Hb_008246_050 Hb_000430_010--Hb_008246_050 Hb_005799_040 Hb_005799_040 Hb_000430_010--Hb_005799_040 Hb_048874_010 Hb_048874_010 Hb_000430_010--Hb_048874_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00688802 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0898855 0.0313133 0

CAGE analysis