Hb_000881_020

Information

Type -
Description -
Location Contig881: 22352-27800
Sequence    

Annotation

kegg
ID vvi:100264035
description dirigent protein 2-like
nr
ID EYU37928.1
description hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
swissprot
ID F4JUF8
description Dirigent protein 15 OS=Arabidopsis thaliana GN=DIR15 PE=3 SV=1
trembl
ID A0A0D9XPN6
description Uncharacterized protein OS=Leersia perrieri PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000881_020 0.0 - - hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
2 Hb_012098_100 0.0297185407 - - zinc finger protein, putative [Ricinus communis]
3 Hb_001158_130 0.0604592578 - - PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas]
4 Hb_000042_280 0.072532652 - - chlorophyll A/B binding protein, putative [Ricinus communis]
5 Hb_004223_150 0.0765170933 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
6 Hb_189208_070 0.0766443818 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
7 Hb_004635_120 0.0805025124 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
8 Hb_001488_230 0.0828954735 - - PREDICTED: serine carboxypeptidase-like 25 isoform X2 [Populus euphratica]
9 Hb_029695_090 0.0895030144 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
10 Hb_000333_020 0.0932519428 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
11 Hb_000538_090 0.0945711216 transcription factor TF Family: NAC hypothetical protein RCOM_1603380 [Ricinus communis]
12 Hb_143629_180 0.0952458725 transcription factor TF Family: MYB myb family transcription factor family protein [Populus trichocarpa]
13 Hb_000608_270 0.0960494414 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000312_100 0.0971720546 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
15 Hb_005337_100 0.0975110885 - - PREDICTED: uncharacterized protein LOC105629349 [Jatropha curcas]
16 Hb_000058_180 0.0982759593 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
17 Hb_002702_010 0.0986483799 - - carbohydrate binding protein, putative [Ricinus communis]
18 Hb_000684_070 0.0995170734 - - PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
19 Hb_002028_020 0.1005910277 - - acyltransferase, putative [Ricinus communis]
20 Hb_009588_010 0.1010943207 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]

Gene co-expression network

sample Hb_000881_020 Hb_000881_020 Hb_012098_100 Hb_012098_100 Hb_000881_020--Hb_012098_100 Hb_001158_130 Hb_001158_130 Hb_000881_020--Hb_001158_130 Hb_000042_280 Hb_000042_280 Hb_000881_020--Hb_000042_280 Hb_004223_150 Hb_004223_150 Hb_000881_020--Hb_004223_150 Hb_189208_070 Hb_189208_070 Hb_000881_020--Hb_189208_070 Hb_004635_120 Hb_004635_120 Hb_000881_020--Hb_004635_120 Hb_012098_100--Hb_000042_280 Hb_012098_100--Hb_001158_130 Hb_001488_230 Hb_001488_230 Hb_012098_100--Hb_001488_230 Hb_012098_100--Hb_189208_070 Hb_009588_010 Hb_009588_010 Hb_012098_100--Hb_009588_010 Hb_001158_130--Hb_189208_070 Hb_000684_070 Hb_000684_070 Hb_001158_130--Hb_000684_070 Hb_001158_130--Hb_000042_280 Hb_001199_110 Hb_001199_110 Hb_001158_130--Hb_001199_110 Hb_000042_280--Hb_001488_230 Hb_000418_130 Hb_000418_130 Hb_000042_280--Hb_000418_130 Hb_002028_020 Hb_002028_020 Hb_000042_280--Hb_002028_020 Hb_000042_280--Hb_009588_010 Hb_149644_030 Hb_149644_030 Hb_000042_280--Hb_149644_030 Hb_012395_090 Hb_012395_090 Hb_004223_150--Hb_012395_090 Hb_001266_010 Hb_001266_010 Hb_004223_150--Hb_001266_010 Hb_029695_090 Hb_029695_090 Hb_004223_150--Hb_029695_090 Hb_002702_010 Hb_002702_010 Hb_004223_150--Hb_002702_010 Hb_000608_270 Hb_000608_270 Hb_004223_150--Hb_000608_270 Hb_000538_090 Hb_000538_090 Hb_189208_070--Hb_000538_090 Hb_189208_070--Hb_009588_010 Hb_012395_240 Hb_012395_240 Hb_189208_070--Hb_012395_240 Hb_001638_200 Hb_001638_200 Hb_004635_120--Hb_001638_200 Hb_004635_120--Hb_012395_240 Hb_000156_110 Hb_000156_110 Hb_004635_120--Hb_000156_110 Hb_004635_120--Hb_000538_090 Hb_000000_390 Hb_000000_390 Hb_004635_120--Hb_000000_390 Hb_032920_020 Hb_032920_020 Hb_004635_120--Hb_032920_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.2594 23.0047 17.6323 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0367255 0 0 0 22.401

CAGE analysis