Hb_000883_080

Information

Type -
Description -
Location Contig883: 114318-116686
Sequence    

Annotation

kegg
ID rcu:RCOM_1110630
description ankyrin repeat-containing protein, putative
nr
ID XP_002521638.1
description ankyrin repeat-containing protein, putative [Ricinus communis]
swissprot
ID Q9C7A2
description Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1
trembl
ID B9S6L9
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1110630 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000883_080 0.0 - - ankyrin repeat-containing protein, putative [Ricinus communis]
2 Hb_002329_050 0.0495768956 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000928_260 0.0591096762 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
4 Hb_011362_010 0.0626293274 - - hypothetical protein JCGZ_14809 [Jatropha curcas]
5 Hb_005483_040 0.0644488896 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
6 Hb_018487_040 0.0646634968 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
7 Hb_006718_030 0.0686148144 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
8 Hb_002301_070 0.0697608898 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_004143_080 0.0699195276 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
10 Hb_003787_030 0.0707207123 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000268_050 0.0724525625 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
12 Hb_000140_040 0.0741228705 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
13 Hb_002250_040 0.0802238372 - - PREDICTED: transcription repressor OFP17 [Jatropha curcas]
14 Hb_001097_110 0.0806910087 - - gibberellin 20-oxidase, putative [Ricinus communis]
15 Hb_000363_070 0.0820248378 - - conserved hypothetical protein [Ricinus communis]
16 Hb_018202_040 0.0831623455 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
17 Hb_000815_120 0.0865055339 - - calcium ion binding protein, putative [Ricinus communis]
18 Hb_006573_240 0.0869127587 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
19 Hb_045260_010 0.0870549451 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
20 Hb_022832_050 0.0872977305 - - PREDICTED: protein argonaute 16 isoform X1 [Sesamum indicum]

Gene co-expression network

sample Hb_000883_080 Hb_000883_080 Hb_002329_050 Hb_002329_050 Hb_000883_080--Hb_002329_050 Hb_000928_260 Hb_000928_260 Hb_000883_080--Hb_000928_260 Hb_011362_010 Hb_011362_010 Hb_000883_080--Hb_011362_010 Hb_005483_040 Hb_005483_040 Hb_000883_080--Hb_005483_040 Hb_018487_040 Hb_018487_040 Hb_000883_080--Hb_018487_040 Hb_006718_030 Hb_006718_030 Hb_000883_080--Hb_006718_030 Hb_000268_050 Hb_000268_050 Hb_002329_050--Hb_000268_050 Hb_002329_050--Hb_005483_040 Hb_002329_050--Hb_011362_010 Hb_002329_050--Hb_018487_040 Hb_002329_050--Hb_000928_260 Hb_002301_070 Hb_002301_070 Hb_000928_260--Hb_002301_070 Hb_003787_030 Hb_003787_030 Hb_000928_260--Hb_003787_030 Hb_006573_240 Hb_006573_240 Hb_000928_260--Hb_006573_240 Hb_010697_020 Hb_010697_020 Hb_000928_260--Hb_010697_020 Hb_004143_080 Hb_004143_080 Hb_000928_260--Hb_004143_080 Hb_011362_010--Hb_000268_050 Hb_000540_080 Hb_000540_080 Hb_011362_010--Hb_000540_080 Hb_000160_120 Hb_000160_120 Hb_011362_010--Hb_000160_120 Hb_096907_010 Hb_096907_010 Hb_011362_010--Hb_096907_010 Hb_005483_040--Hb_018487_040 Hb_002250_040 Hb_002250_040 Hb_005483_040--Hb_002250_040 Hb_005483_040--Hb_006718_030 Hb_005483_040--Hb_011362_010 Hb_002675_220 Hb_002675_220 Hb_018487_040--Hb_002675_220 Hb_018487_040--Hb_002250_040 Hb_001104_070 Hb_001104_070 Hb_018487_040--Hb_001104_070 Hb_080048_030 Hb_080048_030 Hb_018487_040--Hb_080048_030 Hb_006718_030--Hb_002329_050 Hb_006718_030--Hb_000268_050 Hb_000363_070 Hb_000363_070 Hb_006718_030--Hb_000363_070 Hb_000140_040 Hb_000140_040 Hb_006718_030--Hb_000140_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00868349 0.0810235 0.147206 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.4763

CAGE analysis