Hb_000904_090

Information

Type transcription factor
Description TF Family: ERF
Location Contig904: 133413-134231
Sequence    

Annotation

kegg
ID rcu:RCOM_0813580
description hypothetical protein
nr
ID XP_012066876.1
description PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
swissprot
ID Q9SZ06
description Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1
trembl
ID A0A067LCS4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01609 PE=4 SV=1
Gene Ontology
ID GO:0003677
description ethylene-responsive transcription factor erf109-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000904_090 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
2 Hb_000227_410 0.0546899778 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
3 Hb_009683_060 0.0634997728 - - -
4 Hb_104855_020 0.0721849646 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_048538_010 0.0779429443 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Prunus mume]
6 Hb_002475_110 0.0797126567 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
7 Hb_167802_010 0.0799870306 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
8 Hb_114932_010 0.0801989952 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_147137_020 0.0804858633 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
10 Hb_009707_010 0.083472339 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
11 Hb_000338_020 0.0870838151 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
12 Hb_027214_060 0.0893278966 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
13 Hb_013726_100 0.0899234343 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
14 Hb_000347_360 0.0905148718 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
15 Hb_000086_600 0.0919109576 - - -
16 Hb_031862_150 0.0923523701 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
17 Hb_025477_030 0.0945224072 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
18 Hb_001623_020 0.0948043928 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
19 Hb_008579_010 0.0986128966 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
20 Hb_002486_030 0.1014465189 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000904_090 Hb_000904_090 Hb_000227_410 Hb_000227_410 Hb_000904_090--Hb_000227_410 Hb_009683_060 Hb_009683_060 Hb_000904_090--Hb_009683_060 Hb_104855_020 Hb_104855_020 Hb_000904_090--Hb_104855_020 Hb_048538_010 Hb_048538_010 Hb_000904_090--Hb_048538_010 Hb_002475_110 Hb_002475_110 Hb_000904_090--Hb_002475_110 Hb_167802_010 Hb_167802_010 Hb_000904_090--Hb_167802_010 Hb_027214_060 Hb_027214_060 Hb_000227_410--Hb_027214_060 Hb_000227_410--Hb_002475_110 Hb_000347_360 Hb_000347_360 Hb_000227_410--Hb_000347_360 Hb_031862_150 Hb_031862_150 Hb_000227_410--Hb_031862_150 Hb_000227_410--Hb_048538_010 Hb_009683_060--Hb_167802_010 Hb_009683_060--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_009683_060--Hb_001623_020 Hb_114932_010 Hb_114932_010 Hb_009683_060--Hb_114932_010 Hb_000338_020 Hb_000338_020 Hb_009683_060--Hb_000338_020 Hb_008579_010 Hb_008579_010 Hb_104855_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_104855_020--Hb_002486_030 Hb_143232_020 Hb_143232_020 Hb_104855_020--Hb_143232_020 Hb_142691_010 Hb_142691_010 Hb_104855_020--Hb_142691_010 Hb_104855_020--Hb_001623_020 Hb_048538_010--Hb_000347_360 Hb_048538_010--Hb_031862_150 Hb_002849_030 Hb_002849_030 Hb_048538_010--Hb_002849_030 Hb_073870_020 Hb_073870_020 Hb_048538_010--Hb_073870_020 Hb_013726_100 Hb_013726_100 Hb_002475_110--Hb_013726_100 Hb_002475_110--Hb_027214_060 Hb_025477_030 Hb_025477_030 Hb_002475_110--Hb_025477_030 Hb_002475_110--Hb_001623_020 Hb_167802_010--Hb_001623_020 Hb_167802_010--Hb_104855_020 Hb_167802_010--Hb_025477_030 Hb_167802_010--Hb_000338_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.107183 394.039 48.085 63.4166 0 0.0340597
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0654246 0 0 0.0832252 3.51924

CAGE analysis