Hb_000907_080

Information

Type -
Description -
Location Contig907: 71773-95559
Sequence    

Annotation

kegg
ID rcu:RCOM_0582680
description ATP binding protein, putative (EC:2.7.12.1)
nr
ID XP_012080600.1
description PREDICTED: uncharacterized protein LOC105640819 [Jatropha curcas]
swissprot
ID Q9NR20
description Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2
trembl
ID A0A067K3R5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15560 PE=4 SV=1
Gene Ontology
ID GO:0004712
description kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62052: 73398-95618 , PASA_asmbl_62053: 71831-95618
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000907_080 0.0 - - PREDICTED: uncharacterized protein LOC105640819 [Jatropha curcas]
2 Hb_008695_210 0.0577396159 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]
3 Hb_189003_080 0.0681766497 - - PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Jatropha curcas]
4 Hb_006915_050 0.0692377392 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Jatropha curcas]
5 Hb_000001_140 0.0752628425 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Jatropha curcas]
6 Hb_000409_020 0.0755509805 - - PREDICTED: V-type proton ATPase subunit d2 [Jatropha curcas]
7 Hb_000898_040 0.0780467094 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_000207_250 0.0780912685 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
9 Hb_002016_110 0.0849309685 - - transducin family protein [Populus trichocarpa]
10 Hb_000754_040 0.0896276798 - - PREDICTED: uncharacterized protein LOC105115746 [Populus euphratica]
11 Hb_001507_020 0.0898871821 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14170 [Jatropha curcas]
12 Hb_003976_030 0.0900919167 - - PREDICTED: probable phenylalanine--tRNA ligase beta subunit [Jatropha curcas]
13 Hb_003057_110 0.0904137607 - - PREDICTED: uncharacterized protein LOC105639179 [Jatropha curcas]
14 Hb_004738_040 0.0918883192 - - PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Populus euphratica]
15 Hb_001248_130 0.0923530995 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
16 Hb_001277_330 0.0928405184 - - PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Jatropha curcas]
17 Hb_002006_090 0.0931286464 - - PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Jatropha curcas]
18 Hb_002518_140 0.0934040098 - - hypothetical protein JCGZ_18870 [Jatropha curcas]
19 Hb_000280_080 0.0935047027 - - hypothetical protein JCGZ_13377 [Jatropha curcas]
20 Hb_004109_090 0.0942105575 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000907_080 Hb_000907_080 Hb_008695_210 Hb_008695_210 Hb_000907_080--Hb_008695_210 Hb_189003_080 Hb_189003_080 Hb_000907_080--Hb_189003_080 Hb_006915_050 Hb_006915_050 Hb_000907_080--Hb_006915_050 Hb_000001_140 Hb_000001_140 Hb_000907_080--Hb_000001_140 Hb_000409_020 Hb_000409_020 Hb_000907_080--Hb_000409_020 Hb_000898_040 Hb_000898_040 Hb_000907_080--Hb_000898_040 Hb_000614_230 Hb_000614_230 Hb_008695_210--Hb_000614_230 Hb_008695_210--Hb_006915_050 Hb_008695_210--Hb_189003_080 Hb_000754_040 Hb_000754_040 Hb_008695_210--Hb_000754_040 Hb_002006_090 Hb_002006_090 Hb_008695_210--Hb_002006_090 Hb_000567_260 Hb_000567_260 Hb_189003_080--Hb_000567_260 Hb_002016_110 Hb_002016_110 Hb_189003_080--Hb_002016_110 Hb_001671_020 Hb_001671_020 Hb_189003_080--Hb_001671_020 Hb_002026_180 Hb_002026_180 Hb_189003_080--Hb_002026_180 Hb_001248_130 Hb_001248_130 Hb_189003_080--Hb_001248_130 Hb_006915_050--Hb_002016_110 Hb_006915_050--Hb_000754_040 Hb_000111_360 Hb_000111_360 Hb_006915_050--Hb_000111_360 Hb_006915_050--Hb_189003_080 Hb_000001_140--Hb_002006_090 Hb_001329_300 Hb_001329_300 Hb_000001_140--Hb_001329_300 Hb_001051_100 Hb_001051_100 Hb_000001_140--Hb_001051_100 Hb_000001_140--Hb_008695_210 Hb_163145_020 Hb_163145_020 Hb_000001_140--Hb_163145_020 Hb_003206_070 Hb_003206_070 Hb_000409_020--Hb_003206_070 Hb_000409_020--Hb_000898_040 Hb_004109_090 Hb_004109_090 Hb_000409_020--Hb_004109_090 Hb_005663_060 Hb_005663_060 Hb_000409_020--Hb_005663_060 Hb_002687_110 Hb_002687_110 Hb_000409_020--Hb_002687_110 Hb_000409_020--Hb_002016_110 Hb_002217_300 Hb_002217_300 Hb_000898_040--Hb_002217_300 Hb_000207_250 Hb_000207_250 Hb_000898_040--Hb_000207_250 Hb_000898_040--Hb_004109_090 Hb_000080_190 Hb_000080_190 Hb_000898_040--Hb_000080_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.5726 12.1983 9.10879 8.76335 18.6122 22.2741
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.6347 16.052 37.6803 9.61825 10.749

CAGE analysis