Hb_000913_020

Information

Type -
Description -
Location Contig913: 36596-37975
Sequence    

Annotation

kegg
ID rcu:RCOM_1134590
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_002517716.1
description CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
swissprot
ID Q9C562
description CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1
trembl
ID B9RVE7
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_1134590 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting serine threonine-protein kinase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62166: 35447-38249
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000913_020 0.0 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
2 Hb_009780_030 0.0673983825 transcription factor TF Family: GRAS hypothetical protein POPTR_0005s14540g [Populus trichocarpa]
3 Hb_007508_060 0.0726518657 - - PREDICTED: uncharacterized protein LOC105640628 [Jatropha curcas]
4 Hb_000497_300 0.0767910998 - - peroxisomal membrane protein [Hevea brasiliensis]
5 Hb_000340_230 0.077070248 - - synapse-associated protein, putative [Ricinus communis]
6 Hb_002988_040 0.081033847 - - -
7 Hb_001163_100 0.0817506177 - - serine/threonine protein kinase, putative [Ricinus communis]
8 Hb_005686_090 0.0837413626 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
9 Hb_004712_130 0.0870996828 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
10 Hb_005736_020 0.0885697042 - - hypothetical protein POPTR_0005s20940g [Populus trichocarpa]
11 Hb_032202_040 0.0891337408 - - PREDICTED: phospholipase D beta 2 [Jatropha curcas]
12 Hb_000836_040 0.0897137126 - - PREDICTED: AT-rich interactive domain-containing protein 1 isoform X1 [Jatropha curcas]
13 Hb_000116_260 0.0926477213 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
14 Hb_000883_060 0.0948205821 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Jatropha curcas]
15 Hb_000207_330 0.0953938052 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Jatropha curcas]
16 Hb_000556_090 0.09558358 - - PREDICTED: uncharacterized protein LOC105643091 isoform X1 [Jatropha curcas]
17 Hb_010344_050 0.0977094604 - - Adagio 1 -like protein [Gossypium arboreum]
18 Hb_000768_200 0.0981513274 - - hypothetical protein POPTR_0013s06910g [Populus trichocarpa]
19 Hb_164010_030 0.0988416826 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
20 Hb_004052_170 0.099394536 - - PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000913_020 Hb_000913_020 Hb_009780_030 Hb_009780_030 Hb_000913_020--Hb_009780_030 Hb_007508_060 Hb_007508_060 Hb_000913_020--Hb_007508_060 Hb_000497_300 Hb_000497_300 Hb_000913_020--Hb_000497_300 Hb_000340_230 Hb_000340_230 Hb_000913_020--Hb_000340_230 Hb_002988_040 Hb_002988_040 Hb_000913_020--Hb_002988_040 Hb_001163_100 Hb_001163_100 Hb_000913_020--Hb_001163_100 Hb_000768_200 Hb_000768_200 Hb_009780_030--Hb_000768_200 Hb_009780_030--Hb_007508_060 Hb_000207_330 Hb_000207_330 Hb_009780_030--Hb_000207_330 Hb_028697_010 Hb_028697_010 Hb_009780_030--Hb_028697_010 Hb_009780_030--Hb_001163_100 Hb_000665_130 Hb_000665_130 Hb_007508_060--Hb_000665_130 Hb_007508_060--Hb_001163_100 Hb_007508_060--Hb_000340_230 Hb_005686_090 Hb_005686_090 Hb_007508_060--Hb_005686_090 Hb_010344_050 Hb_010344_050 Hb_000497_300--Hb_010344_050 Hb_004712_130 Hb_004712_130 Hb_000497_300--Hb_004712_130 Hb_001352_020 Hb_001352_020 Hb_000497_300--Hb_001352_020 Hb_000116_260 Hb_000116_260 Hb_000497_300--Hb_000116_260 Hb_164010_030 Hb_164010_030 Hb_000497_300--Hb_164010_030 Hb_001789_150 Hb_001789_150 Hb_000497_300--Hb_001789_150 Hb_000340_230--Hb_001163_100 Hb_004052_170 Hb_004052_170 Hb_000340_230--Hb_004052_170 Hb_029510_050 Hb_029510_050 Hb_000340_230--Hb_029510_050 Hb_002495_080 Hb_002495_080 Hb_000340_230--Hb_002495_080 Hb_000340_230--Hb_005686_090 Hb_000230_500 Hb_000230_500 Hb_002988_040--Hb_000230_500 Hb_002988_040--Hb_000497_300 Hb_003020_220 Hb_003020_220 Hb_002988_040--Hb_003020_220 Hb_000041_100 Hb_000041_100 Hb_002988_040--Hb_000041_100 Hb_002988_040--Hb_005686_090 Hb_000260_010 Hb_000260_010 Hb_001163_100--Hb_000260_010 Hb_004672_040 Hb_004672_040 Hb_001163_100--Hb_004672_040 Hb_001163_100--Hb_164010_030 Hb_000009_560 Hb_000009_560 Hb_001163_100--Hb_000009_560 Hb_001377_490 Hb_001377_490 Hb_001163_100--Hb_001377_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.0445 48.4084 27.164 61.0828 33.9328 44.3825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.7555 53.0912 88.6195 35.5248 92.7821

CAGE analysis