Hb_000914_050

Information

Type -
Description -
Location Contig914: 64570-65877
Sequence    

Annotation

kegg
ID rcu:RCOM_1577300
description serine/threonine protein kinase, putative (EC:2.7.11.1)
nr
ID XP_012089961.1
description PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]
swissprot
ID Q9LT38
description Serine/threonine-protein kinase UCNL OS=Arabidopsis thaliana GN=UCNL PE=2 SV=1
trembl
ID A0A067JRA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25895 PE=4 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase oxi1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000914_050 0.0 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]
2 Hb_003102_030 0.1415385184 - - PREDICTED: uncharacterized protein LOC105644418 [Jatropha curcas]
3 Hb_007044_160 0.1502851866 transcription factor TF Family: TCP PREDICTED: transcription factor CYCLOIDEA [Populus euphratica]
4 Hb_002026_020 0.1569904338 - - hypothetical protein POPTR_0012s129501g, partial [Populus trichocarpa]
5 Hb_002374_550 0.1702328651 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
6 Hb_000094_190 0.1705898631 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
7 Hb_005941_030 0.1714964474 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
8 Hb_000011_070 0.1716900819 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
9 Hb_000599_330 0.1737375194 - - hypothetical protein JCGZ_17661 [Jatropha curcas]
10 Hb_000732_240 0.1747169789 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
11 Hb_000099_190 0.1761930174 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
12 Hb_012762_060 0.1863443127 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
13 Hb_004631_170 0.1886976395 - - conserved hypothetical protein [Ricinus communis]
14 Hb_187021_010 0.1887993246 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
15 Hb_008119_030 0.191778869 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
16 Hb_000030_020 0.1974818093 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
17 Hb_000172_230 0.1998566628 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
18 Hb_000330_020 0.2005373053 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
19 Hb_001754_060 0.2016799317 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
20 Hb_186247_010 0.2028588985 - - PREDICTED: uridine 5'-monophosphate synthase-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_000914_050 Hb_000914_050 Hb_003102_030 Hb_003102_030 Hb_000914_050--Hb_003102_030 Hb_007044_160 Hb_007044_160 Hb_000914_050--Hb_007044_160 Hb_002026_020 Hb_002026_020 Hb_000914_050--Hb_002026_020 Hb_002374_550 Hb_002374_550 Hb_000914_050--Hb_002374_550 Hb_000094_190 Hb_000094_190 Hb_000914_050--Hb_000094_190 Hb_005941_030 Hb_005941_030 Hb_000914_050--Hb_005941_030 Hb_003102_030--Hb_007044_160 Hb_003102_030--Hb_005941_030 Hb_000071_160 Hb_000071_160 Hb_003102_030--Hb_000071_160 Hb_000011_070 Hb_000011_070 Hb_003102_030--Hb_000011_070 Hb_003102_030--Hb_002374_550 Hb_007044_160--Hb_005941_030 Hb_007044_160--Hb_002374_550 Hb_007044_160--Hb_000071_160 Hb_001711_080 Hb_001711_080 Hb_007044_160--Hb_001711_080 Hb_001328_050 Hb_001328_050 Hb_002026_020--Hb_001328_050 Hb_006829_070 Hb_006829_070 Hb_002026_020--Hb_006829_070 Hb_000030_020 Hb_000030_020 Hb_002026_020--Hb_000030_020 Hb_012762_060 Hb_012762_060 Hb_002026_020--Hb_012762_060 Hb_002900_150 Hb_002900_150 Hb_002026_020--Hb_002900_150 Hb_003680_030 Hb_003680_030 Hb_002026_020--Hb_003680_030 Hb_002374_550--Hb_005941_030 Hb_000042_060 Hb_000042_060 Hb_002374_550--Hb_000042_060 Hb_014361_090 Hb_014361_090 Hb_002374_550--Hb_014361_090 Hb_000094_190--Hb_012762_060 Hb_001754_060 Hb_001754_060 Hb_000094_190--Hb_001754_060 Hb_000094_190--Hb_002026_020 Hb_000844_030 Hb_000844_030 Hb_000094_190--Hb_000844_030 Hb_000094_190--Hb_002374_550 Hb_005941_030--Hb_000071_160 Hb_014497_040 Hb_014497_040 Hb_005941_030--Hb_014497_040 Hb_011828_010 Hb_011828_010 Hb_005941_030--Hb_011828_010 Hb_003029_060 Hb_003029_060 Hb_005941_030--Hb_003029_060 Hb_005941_030--Hb_014361_090 Hb_009838_020 Hb_009838_020 Hb_005941_030--Hb_009838_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.960773 2.5068 2.70757 6.20631 0.751597 0.903744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0576251 0.107646 0.242016 1.43763

CAGE analysis