Hb_000914_070

Information

Type -
Description -
Location Contig914: 81609-82127
Sequence    

Annotation

kegg
ID pop:POPTR_0003s20450g
description POPTRDRAFT_813758; zinc finger family protein
nr
ID XP_012089967.1
description PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Jatropha curcas]
swissprot
ID A3BDI8
description Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1
trembl
ID A0A067JE11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25898 PE=4 SV=1
Gene Ontology
ID GO:0003677
description zinc finger a20 and an1 domain-containing stress-associated protein 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62180: 81184-84256
cDNA
(Sanger)
(ID:Location)		 038_L08.ab1: 81547-84256

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000914_070 0.0 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Jatropha curcas]
2 Hb_000364_150 0.0905609474 - - -
3 Hb_012490_040 0.0923402341 - - pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus communis]
4 Hb_005117_010 0.0934698922 - - PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Jatropha curcas]
5 Hb_001266_080 0.094360814 - - PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
6 Hb_000347_200 0.0991370118 - - lsm1, putative [Ricinus communis]
7 Hb_004055_140 0.0996181863 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
8 Hb_002902_110 0.1013427232 - - PREDICTED: casein kinase II subunit alpha [Jatropha curcas]
9 Hb_000173_340 0.1019240645 - - hypothetical protein JCGZ_02075 [Jatropha curcas]
10 Hb_002810_030 0.1029871235 - - hypothetical protein VITISV_015705 [Vitis vinifera]
11 Hb_000380_010 0.1065327543 - - PREDICTED: uncharacterized protein LOC105640155 isoform X3 [Jatropha curcas]
12 Hb_071736_010 0.1066208664 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
13 Hb_001454_140 0.1138134597 - - protein arginine n-methyltransferase, putative [Ricinus communis]
14 Hb_012286_050 0.1189317654 - - PREDICTED: syntaxin-61 [Jatropha curcas]
15 Hb_001124_080 0.1198516662 - - RecName: Full=Acyl carrier protein 2, chloroplastic; Short=ACP; Flags: Precursor [Cuphea lanceolata]
16 Hb_011671_220 0.1206490955 - - conserved hypothetical protein [Ricinus communis]
17 Hb_015057_010 0.1215042549 - - PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Jatropha curcas]
18 Hb_000700_110 0.1218937018 - - Vesicle-associated membrane protein, putative [Ricinus communis]
19 Hb_003195_060 0.1225953361 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
20 Hb_008511_050 0.1243160634 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000914_070 Hb_000914_070 Hb_000364_150 Hb_000364_150 Hb_000914_070--Hb_000364_150 Hb_012490_040 Hb_012490_040 Hb_000914_070--Hb_012490_040 Hb_005117_010 Hb_005117_010 Hb_000914_070--Hb_005117_010 Hb_001266_080 Hb_001266_080 Hb_000914_070--Hb_001266_080 Hb_000347_200 Hb_000347_200 Hb_000914_070--Hb_000347_200 Hb_004055_140 Hb_004055_140 Hb_000914_070--Hb_004055_140 Hb_002023_020 Hb_002023_020 Hb_000364_150--Hb_002023_020 Hb_137403_010 Hb_137403_010 Hb_000364_150--Hb_137403_010 Hb_039253_010 Hb_039253_010 Hb_000364_150--Hb_039253_010 Hb_000364_150--Hb_004055_140 Hb_009117_030 Hb_009117_030 Hb_000364_150--Hb_009117_030 Hb_034271_030 Hb_034271_030 Hb_012490_040--Hb_034271_030 Hb_000122_130 Hb_000122_130 Hb_012490_040--Hb_000122_130 Hb_003195_060 Hb_003195_060 Hb_012490_040--Hb_003195_060 Hb_049675_010 Hb_049675_010 Hb_012490_040--Hb_049675_010 Hb_002890_340 Hb_002890_340 Hb_012490_040--Hb_002890_340 Hb_011671_220 Hb_011671_220 Hb_005117_010--Hb_011671_220 Hb_000230_540 Hb_000230_540 Hb_005117_010--Hb_000230_540 Hb_005117_010--Hb_004055_140 Hb_006641_010 Hb_006641_010 Hb_005117_010--Hb_006641_010 Hb_010436_060 Hb_010436_060 Hb_005117_010--Hb_010436_060 Hb_071736_010 Hb_071736_010 Hb_001266_080--Hb_071736_010 Hb_001124_080 Hb_001124_080 Hb_001266_080--Hb_001124_080 Hb_007426_030 Hb_007426_030 Hb_001266_080--Hb_007426_030 Hb_001266_080--Hb_004055_140 Hb_001266_080--Hb_009117_030 Hb_000173_340 Hb_000173_340 Hb_000347_200--Hb_000173_340 Hb_000700_110 Hb_000700_110 Hb_000347_200--Hb_000700_110 Hb_006198_080 Hb_006198_080 Hb_000347_200--Hb_006198_080 Hb_003092_030 Hb_003092_030 Hb_000347_200--Hb_003092_030 Hb_012305_050 Hb_012305_050 Hb_000347_200--Hb_012305_050 Hb_000024_080 Hb_000024_080 Hb_000347_200--Hb_000024_080 Hb_002616_050 Hb_002616_050 Hb_004055_140--Hb_002616_050 Hb_028872_140 Hb_028872_140 Hb_004055_140--Hb_028872_140 Hb_033642_010 Hb_033642_010 Hb_004055_140--Hb_033642_010 Hb_001454_140 Hb_001454_140 Hb_004055_140--Hb_001454_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
182.817 80.8084 26.0539 127.974 180.195 585.539
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
292.442 204.157 346.233 126.33 115.217

CAGE analysis