Hb_000914_100

Information

Type -
Description -
Location Contig914: 93408-97200
Sequence    

Annotation

kegg
ID mtr:MTR_2g098150
description Zinc transporter ZupT
nr
ID ACU18618.1
description unknown [Glycine max]
swissprot
ID Q940Q3
description Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1
trembl
ID C6T9W6
description Putative uncharacterized protein OS=Glycine max PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000914_100 0.0 - - unknown [Glycine max]
2 Hb_019040_030 0.0956059181 - - PREDICTED: probable ribosome-binding factor A, chloroplastic [Jatropha curcas]
3 Hb_008147_080 0.0978664951 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
4 Hb_000077_150 0.1001121837 - - PREDICTED: riboflavin synthase [Jatropha curcas]
5 Hb_002900_110 0.1044795651 - - amino acid transporter, putative [Ricinus communis]
6 Hb_002811_010 0.1094576771 - - cysteine synthase, putative [Ricinus communis]
7 Hb_000197_220 0.1149469469 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
8 Hb_001898_180 0.1155638779 - - PREDICTED: translation initiation factor IF-1, chloroplastic [Jatropha curcas]
9 Hb_003106_190 0.1170133686 - - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis]
10 Hb_004644_030 0.1179447143 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
11 Hb_001214_050 0.1196318987 - - PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Jatropha curcas]
12 Hb_001677_220 0.119742092 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
13 Hb_000032_500 0.1199404249 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
14 Hb_000189_450 0.1203020014 - - Zeta-carotene desaturase, chloroplast precursor, putative [Ricinus communis]
15 Hb_000008_350 0.1203425416 - - -
16 Hb_020025_010 0.124706756 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
17 Hb_005731_160 0.1263254046 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_001578_020 0.1276765804 - - Protein virR, putative [Ricinus communis]
19 Hb_010288_060 0.1291424777 - - PREDICTED: dnaJ protein ERDJ3B [Jatropha curcas]
20 Hb_000200_010 0.1295821239 - - PREDICTED: MATE efflux family protein 8-like [Jatropha curcas]

Gene co-expression network

sample Hb_000914_100 Hb_000914_100 Hb_019040_030 Hb_019040_030 Hb_000914_100--Hb_019040_030 Hb_008147_080 Hb_008147_080 Hb_000914_100--Hb_008147_080 Hb_000077_150 Hb_000077_150 Hb_000914_100--Hb_000077_150 Hb_002900_110 Hb_002900_110 Hb_000914_100--Hb_002900_110 Hb_002811_010 Hb_002811_010 Hb_000914_100--Hb_002811_010 Hb_000197_220 Hb_000197_220 Hb_000914_100--Hb_000197_220 Hb_001898_180 Hb_001898_180 Hb_019040_030--Hb_001898_180 Hb_007632_170 Hb_007632_170 Hb_019040_030--Hb_007632_170 Hb_019040_030--Hb_000077_150 Hb_000156_210 Hb_000156_210 Hb_019040_030--Hb_000156_210 Hb_001214_050 Hb_001214_050 Hb_019040_030--Hb_001214_050 Hb_004644_030 Hb_004644_030 Hb_008147_080--Hb_004644_030 Hb_005218_080 Hb_005218_080 Hb_008147_080--Hb_005218_080 Hb_008375_010 Hb_008375_010 Hb_008147_080--Hb_008375_010 Hb_001578_020 Hb_001578_020 Hb_008147_080--Hb_001578_020 Hb_000388_060 Hb_000388_060 Hb_008147_080--Hb_000388_060 Hb_008147_080--Hb_000077_150 Hb_000077_150--Hb_004644_030 Hb_002762_110 Hb_002762_110 Hb_000077_150--Hb_002762_110 Hb_000077_150--Hb_001214_050 Hb_003106_190 Hb_003106_190 Hb_000077_150--Hb_003106_190 Hb_002078_340 Hb_002078_340 Hb_000077_150--Hb_002078_340 Hb_000077_150--Hb_002811_010 Hb_000139_340 Hb_000139_340 Hb_002900_110--Hb_000139_340 Hb_001277_030 Hb_001277_030 Hb_002900_110--Hb_001277_030 Hb_001571_060 Hb_001571_060 Hb_002900_110--Hb_001571_060 Hb_094970_010 Hb_094970_010 Hb_002900_110--Hb_094970_010 Hb_000510_080 Hb_000510_080 Hb_002900_110--Hb_000510_080 Hb_005731_160 Hb_005731_160 Hb_002811_010--Hb_005731_160 Hb_055619_010 Hb_055619_010 Hb_002811_010--Hb_055619_010 Hb_002811_010--Hb_003106_190 Hb_000613_110 Hb_000613_110 Hb_002811_010--Hb_000613_110 Hb_000120_290 Hb_000120_290 Hb_002811_010--Hb_000120_290 Hb_004785_080 Hb_004785_080 Hb_000197_220--Hb_004785_080 Hb_000896_050 Hb_000896_050 Hb_000197_220--Hb_000896_050 Hb_000197_220--Hb_003106_190 Hb_001098_050 Hb_001098_050 Hb_000197_220--Hb_001098_050 Hb_000010_290 Hb_000010_290 Hb_000197_220--Hb_000010_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.390111 0.53979 0.994043 1.31238 0.508483 0.582858
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.18618 1.44049 0.498428 1.71329 3.45994

CAGE analysis