Hb_000915_150

Information

Type -
Description -
Location Contig915: 123858-125358
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000915_150 0.0 - - -
2 Hb_001489_140 0.1314854984 transcription factor TF Family: AP2 hypothetical protein JCGZ_21694 [Jatropha curcas]
3 Hb_011377_010 0.2477280409 - - PREDICTED: nudix hydrolase 12, mitochondrial-like [Populus euphratica]
4 Hb_084858_010 0.2653375419 - - Uncharacterized protein isoform 3 [Theobroma cacao]
5 Hb_057247_010 0.2694551483 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
6 Hb_000849_050 0.2741916361 - - hypothetical protein VITISV_010852 [Vitis vinifera]
7 Hb_172572_010 0.2758406416 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
8 Hb_004102_050 0.2820716862 - - JHL25H03.10 [Jatropha curcas]
9 Hb_005839_100 0.2843590047 - - PREDICTED: APO protein 1, chloroplastic isoform X3 [Jatropha curcas]
10 Hb_003238_010 0.2950268682 - - PREDICTED: uncharacterized protein LOC104880636 [Vitis vinifera]
11 Hb_000256_120 0.297953698 - - PREDICTED: probable receptor-like protein kinase At1g80640 [Jatropha curcas]
12 Hb_010534_050 0.3009039909 - - PREDICTED: 40S ribosomal protein S7 [Jatropha curcas]
13 Hb_006769_010 0.3031426086 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
14 Hb_002232_150 0.3048970803 - - PREDICTED: squalene monooxygenase-like [Jatropha curcas]
15 Hb_000164_150 0.3098557601 - - serine/threonine-specific protein kinase, putative [Ricinus communis]
16 Hb_094437_010 0.312977736 - - -
17 Hb_018691_010 0.3144699709 - - -
18 Hb_007846_040 0.3189372505 - - PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
19 Hb_001486_140 0.3203327327 - - PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera]
20 Hb_005147_050 0.3230247186 - - PREDICTED: ankyrin-2-like [Citrus sinensis]

Gene co-expression network

sample Hb_000915_150 Hb_000915_150 Hb_001489_140 Hb_001489_140 Hb_000915_150--Hb_001489_140 Hb_011377_010 Hb_011377_010 Hb_000915_150--Hb_011377_010 Hb_084858_010 Hb_084858_010 Hb_000915_150--Hb_084858_010 Hb_057247_010 Hb_057247_010 Hb_000915_150--Hb_057247_010 Hb_000849_050 Hb_000849_050 Hb_000915_150--Hb_000849_050 Hb_172572_010 Hb_172572_010 Hb_000915_150--Hb_172572_010 Hb_001489_140--Hb_011377_010 Hb_000256_120 Hb_000256_120 Hb_001489_140--Hb_000256_120 Hb_000164_150 Hb_000164_150 Hb_001489_140--Hb_000164_150 Hb_001489_140--Hb_000849_050 Hb_096473_010 Hb_096473_010 Hb_001489_140--Hb_096473_010 Hb_000165_120 Hb_000165_120 Hb_011377_010--Hb_000165_120 Hb_000692_210 Hb_000692_210 Hb_011377_010--Hb_000692_210 Hb_005725_230 Hb_005725_230 Hb_011377_010--Hb_005725_230 Hb_000836_610 Hb_000836_610 Hb_011377_010--Hb_000836_610 Hb_000724_030 Hb_000724_030 Hb_084858_010--Hb_000724_030 Hb_000062_060 Hb_000062_060 Hb_084858_010--Hb_000062_060 Hb_002232_150 Hb_002232_150 Hb_084858_010--Hb_002232_150 Hb_007846_040 Hb_007846_040 Hb_084858_010--Hb_007846_040 Hb_004724_120 Hb_004724_120 Hb_084858_010--Hb_004724_120 Hb_000270_210 Hb_000270_210 Hb_084858_010--Hb_000270_210 Hb_005883_040 Hb_005883_040 Hb_057247_010--Hb_005883_040 Hb_076233_020 Hb_076233_020 Hb_057247_010--Hb_076233_020 Hb_004570_050 Hb_004570_050 Hb_057247_010--Hb_004570_050 Hb_006816_340 Hb_006816_340 Hb_057247_010--Hb_006816_340 Hb_000136_190 Hb_000136_190 Hb_057247_010--Hb_000136_190 Hb_182249_010 Hb_182249_010 Hb_057247_010--Hb_182249_010 Hb_001935_090 Hb_001935_090 Hb_000849_050--Hb_001935_090 Hb_025964_040 Hb_025964_040 Hb_000849_050--Hb_025964_040 Hb_000242_030 Hb_000242_030 Hb_000849_050--Hb_000242_030 Hb_004052_160 Hb_004052_160 Hb_000849_050--Hb_004052_160 Hb_006120_080 Hb_006120_080 Hb_000849_050--Hb_006120_080 Hb_000849_050--Hb_182249_010 Hb_094437_010 Hb_094437_010 Hb_172572_010--Hb_094437_010 Hb_036026_010 Hb_036026_010 Hb_172572_010--Hb_036026_010 Hb_154381_010 Hb_154381_010 Hb_172572_010--Hb_154381_010 Hb_003551_040 Hb_003551_040 Hb_172572_010--Hb_003551_040 Hb_010534_050 Hb_010534_050 Hb_172572_010--Hb_010534_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0608097 0.0632571 0.100331 0.0828176 0 0.120006
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0935012 0

CAGE analysis