Hb_000915_190

Information

Type -
Description -
Location Contig915: 165367-174144
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000915_190 0.0 - - -
2 Hb_001814_060 0.1528618596 - - PREDICTED: uncharacterized protein LOC105650637 [Jatropha curcas]
3 Hb_010171_010 0.2335805684 - - hypothetical protein VITISV_033646 [Vitis vinifera]
4 Hb_007793_030 0.2350335666 - - OSJNBa0074B10.6 [Oryza sativa Japonica Group]
5 Hb_001054_010 0.237102277 - - hypothetical protein VITISV_011091 [Vitis vinifera]
6 Hb_000659_090 0.2389208038 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]
7 Hb_006237_030 0.2392367227 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_128750_010 0.2404348782 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
9 Hb_000445_160 0.2504487585 - - PREDICTED: probable calcium-binding protein CML44 [Jatropha curcas]
10 Hb_025161_030 0.2603312621 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
11 Hb_095937_010 0.2610259876 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
12 Hb_145620_010 0.2649233832 - - hypothetical protein VITISV_019786 [Vitis vinifera]
13 Hb_014988_030 0.2708961312 - - hypothetical protein VITISV_006810 [Vitis vinifera]
14 Hb_002411_020 0.2727331965 - - hypothetical protein JCGZ_24577 [Jatropha curcas]
15 Hb_086993_010 0.272813716 - - -
16 Hb_000275_100 0.2729432064 - - BnaC09g26910D [Brassica napus]
17 Hb_133191_010 0.2762613963 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
18 Hb_011649_040 0.2769564405 - - hypothetical protein CISIN_1g039733mg [Citrus sinensis]
19 Hb_000363_450 0.2801243514 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
20 Hb_170878_020 0.2838741277 - - -

Gene co-expression network

sample Hb_000915_190 Hb_000915_190 Hb_001814_060 Hb_001814_060 Hb_000915_190--Hb_001814_060 Hb_010171_010 Hb_010171_010 Hb_000915_190--Hb_010171_010 Hb_007793_030 Hb_007793_030 Hb_000915_190--Hb_007793_030 Hb_001054_010 Hb_001054_010 Hb_000915_190--Hb_001054_010 Hb_000659_090 Hb_000659_090 Hb_000915_190--Hb_000659_090 Hb_006237_030 Hb_006237_030 Hb_000915_190--Hb_006237_030 Hb_000049_130 Hb_000049_130 Hb_001814_060--Hb_000049_130 Hb_000363_450 Hb_000363_450 Hb_001814_060--Hb_000363_450 Hb_000445_160 Hb_000445_160 Hb_001814_060--Hb_000445_160 Hb_000483_320 Hb_000483_320 Hb_001814_060--Hb_000483_320 Hb_128750_010 Hb_128750_010 Hb_001814_060--Hb_128750_010 Hb_000275_100 Hb_000275_100 Hb_010171_010--Hb_000275_100 Hb_011649_040 Hb_011649_040 Hb_010171_010--Hb_011649_040 Hb_145745_020 Hb_145745_020 Hb_010171_010--Hb_145745_020 Hb_010171_010--Hb_000483_320 Hb_007237_100 Hb_007237_100 Hb_010171_010--Hb_007237_100 Hb_000968_070 Hb_000968_070 Hb_007793_030--Hb_000968_070 Hb_006483_120 Hb_006483_120 Hb_007793_030--Hb_006483_120 Hb_008484_020 Hb_008484_020 Hb_007793_030--Hb_008484_020 Hb_003291_030 Hb_003291_030 Hb_007793_030--Hb_003291_030 Hb_182651_020 Hb_182651_020 Hb_007793_030--Hb_182651_020 Hb_002973_120 Hb_002973_120 Hb_007793_030--Hb_002973_120 Hb_002411_020 Hb_002411_020 Hb_001054_010--Hb_002411_020 Hb_000157_110 Hb_000157_110 Hb_001054_010--Hb_000157_110 Hb_017098_010 Hb_017098_010 Hb_001054_010--Hb_017098_010 Hb_125431_010 Hb_125431_010 Hb_001054_010--Hb_125431_010 Hb_002400_150 Hb_002400_150 Hb_001054_010--Hb_002400_150 Hb_000659_090--Hb_006237_030 Hb_095937_010 Hb_095937_010 Hb_000659_090--Hb_095937_010 Hb_145620_010 Hb_145620_010 Hb_000659_090--Hb_145620_010 Hb_000421_280 Hb_000421_280 Hb_000659_090--Hb_000421_280 Hb_007975_020 Hb_007975_020 Hb_000659_090--Hb_007975_020 Hb_000811_090 Hb_000811_090 Hb_000659_090--Hb_000811_090 Hb_006237_030--Hb_095937_010 Hb_006237_030--Hb_145620_010 Hb_006237_030--Hb_000421_280 Hb_006237_030--Hb_000811_090 Hb_006237_030--Hb_007975_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0215142 0.0239381 0 0.0342831
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0209096 0.103972

CAGE analysis