Hb_000915_210

Information

Type -
Description -
Location Contig915: 181452-192499
Sequence    

Annotation

kegg
ID rcu:RCOM_0291720
description hypothetical protein
nr
ID XP_002531511.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8S950
description Kinesin-like protein NACK1 OS=Nicotiana tabacum GN=NACK1 PE=1 SV=1
trembl
ID B9SZU2
description Kinesin-like protein OS=Ricinus communis GN=RCOM_0291720 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein nack1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62231: 181605-191328 , PASA_asmbl_62232: 182407-182619 , PASA_asmbl_62233: 184560-184994
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000915_210 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002743_010 0.0315518961 - - conserved hypothetical protein [Ricinus communis]
3 Hb_014056_020 0.0335757199 - - zinc finger protein, putative [Ricinus communis]
4 Hb_006117_030 0.0434129358 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002965_170 0.0496697006 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
6 Hb_000731_150 0.0524296548 - - PREDICTED: cytochrome P450 77A1 [Jatropha curcas]
7 Hb_001571_100 0.0532810263 - - chlorophyll A-B binding family protein [Populus trichocarpa]
8 Hb_000512_120 0.0545410196 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor NGA1-like [Jatropha curcas]
9 Hb_000333_010 0.0554627124 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]
10 Hb_000557_070 0.0560784752 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
11 Hb_001519_140 0.0562548841 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis vinifera]
12 Hb_001135_310 0.0568536452 - - Chlorophyll a-b binding protein 6A [Morus notabilis]
13 Hb_001205_220 0.0604452181 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001205_140 0.0605112133 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
15 Hb_005280_020 0.0611494277 - - glycine cleavage system h protein, putative [Ricinus communis]
16 Hb_007187_010 0.061524413 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
17 Hb_000719_030 0.0633126947 - - Photosystem I reaction center subunit III, chloroplast precursor, putative [Ricinus communis]
18 Hb_005345_020 0.0641218688 - - Root phototropism protein, putative [Ricinus communis]
19 Hb_011382_010 0.0644729404 - - hypothetical protein CICLE_v10028106mg [Citrus clementina]
20 Hb_001675_090 0.0653068757 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000915_210 Hb_000915_210 Hb_002743_010 Hb_002743_010 Hb_000915_210--Hb_002743_010 Hb_014056_020 Hb_014056_020 Hb_000915_210--Hb_014056_020 Hb_006117_030 Hb_006117_030 Hb_000915_210--Hb_006117_030 Hb_002965_170 Hb_002965_170 Hb_000915_210--Hb_002965_170 Hb_000731_150 Hb_000731_150 Hb_000915_210--Hb_000731_150 Hb_001571_100 Hb_001571_100 Hb_000915_210--Hb_001571_100 Hb_002743_010--Hb_014056_020 Hb_002743_010--Hb_001571_100 Hb_001135_310 Hb_001135_310 Hb_002743_010--Hb_001135_310 Hb_000512_120 Hb_000512_120 Hb_002743_010--Hb_000512_120 Hb_002743_010--Hb_000731_150 Hb_014056_020--Hb_002965_170 Hb_014056_020--Hb_006117_030 Hb_001519_140 Hb_001519_140 Hb_014056_020--Hb_001519_140 Hb_001205_220 Hb_001205_220 Hb_014056_020--Hb_001205_220 Hb_006117_030--Hb_002965_170 Hb_001205_140 Hb_001205_140 Hb_006117_030--Hb_001205_140 Hb_000557_070 Hb_000557_070 Hb_006117_030--Hb_000557_070 Hb_004724_090 Hb_004724_090 Hb_006117_030--Hb_004724_090 Hb_002965_170--Hb_001519_140 Hb_002965_170--Hb_001205_220 Hb_000834_160 Hb_000834_160 Hb_002965_170--Hb_000834_160 Hb_000731_150--Hb_001205_220 Hb_004993_020 Hb_004993_020 Hb_000731_150--Hb_004993_020 Hb_000731_150--Hb_000557_070 Hb_000731_150--Hb_001519_140 Hb_068580_010 Hb_068580_010 Hb_000731_150--Hb_068580_010 Hb_002028_020 Hb_002028_020 Hb_001571_100--Hb_002028_020 Hb_005345_020 Hb_005345_020 Hb_001571_100--Hb_005345_020 Hb_000333_010 Hb_000333_010 Hb_001571_100--Hb_000333_010 Hb_041433_010 Hb_041433_010 Hb_001571_100--Hb_041433_010 Hb_001571_100--Hb_000557_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00536467 0.19686 24.4758 9.65097 0.0697919 0.0145257
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0183479 0.0379118 25.3207

CAGE analysis