Hb_000917_330

Information

Type -
Description -
Location Contig917: 361224-363654
Sequence    

Annotation

kegg
ID pop:POPTR_0008s11540g
description POPTRDRAFT_656768; hypothetical protein
nr
ID XP_012082024.1
description PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
swissprot
ID Q84V83
description Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1
trembl
ID A0A067JZG2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18282 PE=4 SV=1
Gene Ontology
ID GO:0000166
description leucoanthocyanidin reductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000917_330 0.0 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
2 Hb_000625_130 0.0520554726 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
3 Hb_001936_030 0.0736940875 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
4 Hb_003166_020 0.0864665151 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
5 Hb_001691_060 0.0980576088 - - lipoxygenase, putative [Ricinus communis]
6 Hb_000075_030 0.1089897344 - - PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
7 Hb_025469_040 0.1109128124 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
8 Hb_142522_030 0.1261947271 - - hypothetical protein JCGZ_21596 [Jatropha curcas]
9 Hb_032621_010 0.1268764875 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
10 Hb_011145_020 0.1307519667 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
11 Hb_131864_020 0.1334377174 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
12 Hb_001473_100 0.1347099445 - - chalcone synthase 1 [Jatropha curcas]
13 Hb_026650_010 0.1350132585 - - nitrate transporter, putative [Ricinus communis]
14 Hb_000815_280 0.1362325137 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
15 Hb_000668_070 0.1383295733 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002248_020 0.1396650539 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
17 Hb_004774_060 0.1428915842 - - -
18 Hb_007044_070 0.1429702406 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
19 Hb_000194_080 0.1442809358 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
20 Hb_002218_040 0.1447202102 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000917_330 Hb_000917_330 Hb_000625_130 Hb_000625_130 Hb_000917_330--Hb_000625_130 Hb_001936_030 Hb_001936_030 Hb_000917_330--Hb_001936_030 Hb_003166_020 Hb_003166_020 Hb_000917_330--Hb_003166_020 Hb_001691_060 Hb_001691_060 Hb_000917_330--Hb_001691_060 Hb_000075_030 Hb_000075_030 Hb_000917_330--Hb_000075_030 Hb_025469_040 Hb_025469_040 Hb_000917_330--Hb_025469_040 Hb_000625_130--Hb_001936_030 Hb_142522_030 Hb_142522_030 Hb_000625_130--Hb_142522_030 Hb_001377_480 Hb_001377_480 Hb_000625_130--Hb_001377_480 Hb_000625_130--Hb_025469_040 Hb_000625_130--Hb_003166_020 Hb_002248_020 Hb_002248_020 Hb_001936_030--Hb_002248_020 Hb_001936_030--Hb_025469_040 Hb_007044_070 Hb_007044_070 Hb_001936_030--Hb_007044_070 Hb_004774_060 Hb_004774_060 Hb_001936_030--Hb_004774_060 Hb_032621_010 Hb_032621_010 Hb_003166_020--Hb_032621_010 Hb_026650_010 Hb_026650_010 Hb_003166_020--Hb_026650_010 Hb_000800_060 Hb_000800_060 Hb_003166_020--Hb_000800_060 Hb_000668_070 Hb_000668_070 Hb_003166_020--Hb_000668_070 Hb_069151_010 Hb_069151_010 Hb_003166_020--Hb_069151_010 Hb_011145_020 Hb_011145_020 Hb_001691_060--Hb_011145_020 Hb_000005_350 Hb_000005_350 Hb_001691_060--Hb_000005_350 Hb_001691_060--Hb_000075_030 Hb_001922_010 Hb_001922_010 Hb_001691_060--Hb_001922_010 Hb_000589_100 Hb_000589_100 Hb_001691_060--Hb_000589_100 Hb_001005_210 Hb_001005_210 Hb_000075_030--Hb_001005_210 Hb_032631_080 Hb_032631_080 Hb_000075_030--Hb_032631_080 Hb_002218_040 Hb_002218_040 Hb_000075_030--Hb_002218_040 Hb_000075_030--Hb_001922_010 Hb_131864_020 Hb_131864_020 Hb_025469_040--Hb_131864_020 Hb_001473_100 Hb_001473_100 Hb_025469_040--Hb_001473_100 Hb_000631_130 Hb_000631_130 Hb_025469_040--Hb_000631_130 Hb_025469_040--Hb_007044_070 Hb_148914_010 Hb_148914_010 Hb_025469_040--Hb_148914_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.77187 16.1712 8.99873 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0242524 0 73.9871 2.08121

CAGE analysis