Hb_000920_240

Information

Type -
Description -
Location Contig920: 134172-134969
Sequence    

Annotation

kegg
ID rcu:RCOM_1452700
description electron transporter, putative
nr
ID XP_012068648.1
description PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067KWD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24520 PE=4 SV=1
Gene Ontology
ID GO:0005623
description glutaredoxin family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62415: 133713-135431
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_240 0.0 - - PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]
2 Hb_000030_150 0.1032289958 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
3 Hb_003787_020 0.1044804742 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Jatropha curcas]
4 Hb_000997_400 0.1101478342 - - PREDICTED: pentatricopeptide repeat-containing protein At1g50270 [Jatropha curcas]
5 Hb_029866_040 0.1104096569 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
6 Hb_000297_200 0.1119921851 - - PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vinifera]
7 Hb_000001_050 0.1135638479 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
8 Hb_004724_420 0.1138957463 - - fucose synthetase, putative [Ricinus communis]
9 Hb_000614_230 0.1154538961 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
10 Hb_003266_130 0.1222742021 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
11 Hb_000059_220 0.1228029591 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
12 Hb_006922_110 0.1235696856 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
13 Hb_002006_090 0.1244063498 - - PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Jatropha curcas]
14 Hb_011381_100 0.1261309288 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
15 Hb_000377_060 0.1261482638 - - ARF GTPase activator, putative [Ricinus communis]
16 Hb_064997_010 0.1277659484 - - hypothetical protein JCGZ_19852 [Jatropha curcas]
17 Hb_000629_120 0.1280460111 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma cacao]
18 Hb_000840_210 0.128444144 - - actin actin-like protein [Coniophora puteana RWD-64-598 SS2]
19 Hb_009879_010 0.1295637387 - - phosphate transporter 1 [Hevea brasiliensis]
20 Hb_003943_040 0.1300360081 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000920_240 Hb_000920_240 Hb_000030_150 Hb_000030_150 Hb_000920_240--Hb_000030_150 Hb_003787_020 Hb_003787_020 Hb_000920_240--Hb_003787_020 Hb_000997_400 Hb_000997_400 Hb_000920_240--Hb_000997_400 Hb_029866_040 Hb_029866_040 Hb_000920_240--Hb_029866_040 Hb_000297_200 Hb_000297_200 Hb_000920_240--Hb_000297_200 Hb_000001_050 Hb_000001_050 Hb_000920_240--Hb_000001_050 Hb_061802_020 Hb_061802_020 Hb_000030_150--Hb_061802_020 Hb_006949_040 Hb_006949_040 Hb_000030_150--Hb_006949_040 Hb_002909_070 Hb_002909_070 Hb_000030_150--Hb_002909_070 Hb_000030_150--Hb_003787_020 Hb_002890_280 Hb_002890_280 Hb_000030_150--Hb_002890_280 Hb_006647_020 Hb_006647_020 Hb_003787_020--Hb_006647_020 Hb_002006_090 Hb_002006_090 Hb_003787_020--Hb_002006_090 Hb_003787_020--Hb_061802_020 Hb_007924_020 Hb_007924_020 Hb_003787_020--Hb_007924_020 Hb_000614_230 Hb_000614_230 Hb_003787_020--Hb_000614_230 Hb_000997_400--Hb_000297_200 Hb_000059_220 Hb_000059_220 Hb_000997_400--Hb_000059_220 Hb_003018_190 Hb_003018_190 Hb_000997_400--Hb_003018_190 Hb_000482_010 Hb_000482_010 Hb_000997_400--Hb_000482_010 Hb_000457_150 Hb_000457_150 Hb_000997_400--Hb_000457_150 Hb_010710_040 Hb_010710_040 Hb_000997_400--Hb_010710_040 Hb_000377_060 Hb_000377_060 Hb_029866_040--Hb_000377_060 Hb_005431_010 Hb_005431_010 Hb_029866_040--Hb_005431_010 Hb_029866_040--Hb_000001_050 Hb_011381_100 Hb_011381_100 Hb_029866_040--Hb_011381_100 Hb_001109_020 Hb_001109_020 Hb_029866_040--Hb_001109_020 Hb_000009_160 Hb_000009_160 Hb_029866_040--Hb_000009_160 Hb_000297_200--Hb_000457_150 Hb_029584_130 Hb_029584_130 Hb_000297_200--Hb_029584_130 Hb_000935_050 Hb_000935_050 Hb_000297_200--Hb_000935_050 Hb_000007_150 Hb_000007_150 Hb_000297_200--Hb_000007_150 Hb_000297_200--Hb_000059_220 Hb_000046_110 Hb_000046_110 Hb_000001_050--Hb_000046_110 Hb_071736_020 Hb_071736_020 Hb_000001_050--Hb_071736_020 Hb_008311_010 Hb_008311_010 Hb_000001_050--Hb_008311_010 Hb_001677_110 Hb_001677_110 Hb_000001_050--Hb_001677_110 Hb_000260_120 Hb_000260_120 Hb_000001_050--Hb_000260_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
306.574 100.003 35.1944 192.642 127.867 267.648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
253.51 298.095 501.066 56.5301 63.3606

CAGE analysis